GetDimReduction: Dimensional Reduction Accessor Function
In mayer-lab/SeuratForMayer2018: Seurat : R Toolkit for Single Cell Genomics
Description
Usage
Arguments
Value
Description
General accessor function for dimensional reduction objects. Pulls slot
contents for specified stored dimensional reduction analysis.
Usage
1
GetDimReduction(object, reduction.type = "pca", slot = "gene.loadings")
Arguments
object
Seurat object
reduction.type
Type of dimensional reduction to fetch (default is PCA)
slot
Specific information to pull (must be one of the following:
"cell.embeddings", "gene.loadings", "gene.loadings.full", "sdev", "key", "misc")
Value
Returns specified slot results from given reduction technique
mayer-lab/SeuratForMayer2018 documentation built on May 25, 2019, 9:34 p.m.
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Description Usage Arguments Value
Description
General accessor function for dimensional reduction objects. Pulls slot contents for specified stored dimensional reduction analysis.
Usage
1 | GetDimReduction(object, reduction.type = "pca", slot = "gene.loadings")
|
Arguments
object |
Seurat object |
reduction.type |
Type of dimensional reduction to fetch (default is PCA) |
slot |
Specific information to pull (must be one of the following: "cell.embeddings", "gene.loadings", "gene.loadings.full", "sdev", "key", "misc") |
Value
Returns specified slot results from given reduction technique
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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