GetGeneLoadings: Dimensional Reduction Gene Loadings Accessor Function

In mayer-lab/SeuratForMayer2018: Seurat : R Toolkit for Single Cell Genomics

Description

Pull gene loadings matrix for specified stored dimensional reduction analysis.

Usage

GetGeneLoadings(object, reduction.type = "pca", dims.use = NULL,
  genes.use = NULL, use.full = FALSE)

Arguments

object	Seurat object
reduction.type	Type of dimensional reduction to fetch (default is PCA)
dims.use	Dimensions to include (default is all stored dims)
genes.use	Genes to include (default is all genes)
use.full	Return projected gene loadings (default is FALSE)

Value

Gene loading matrix for given reduction, cells, and genes

mayer-lab/SeuratForMayer2018 documentation built on May 25, 2019, 9:34 p.m.