ICTopGenes: Find genes with highest ICA scores

In mayer-lab/SeuratForMayer2018: Seurat : R Toolkit for Single Cell Genomics

Description

Return a list of genes with the strongest contribution to a set of indepdendent components

Usage

ICTopGenes(object, ic.use = 1, num.genes = 30, use.full = FALSE,
  do.balanced = FALSE)

Arguments

object	Seurat object
ic.use	Independent components to use
num.genes	Number of genes to return
use.full	Use the full ICA (projected ICA), default is FALSE
do.balanced	Return an equal number of genes with both + and - IC scores.

Value

Returns a vector of genes

mayer-lab/SeuratForMayer2018 documentation built on May 25, 2019, 9:34 p.m.