Chromosome-class: Class Chromosome
In mcanouil/snpEnrichment: SNPs Enrichment Analysis With Sampling
Description
Class Chromosome
Constructor generic for Chromosome
Constructor method for Chromosome
Slots
DataA data.frame with 6 columns ("SNP", "PVALUE", "CHR", "MAF", "eSNP", "xSNP").
Where "eSNP" and "xSNP" are logical columns defining the lists of SNPs (extended or not).
LDA data.frame which contains LD informations between SNPs (computed with writeLD or PLINK).
eSNPContain a EnrichSNP object for a list of SNPs (eSNP).
xSNPContain a EnrichSNP object for a extended list of SNPs (xSNP).
mcanouil/snpEnrichment documentation built on Sept. 19, 2021, 1:21 a.m.
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Description
Class Chromosome
Constructor generic for Chromosome
Constructor method for Chromosome
Slots
DataA data.frame with 6 columns (
"SNP","PVALUE","CHR","MAF","eSNP","xSNP"). Where"eSNP"and"xSNP"are logical columns defining the lists of SNPs (extended or not).LDA data.frame which contains LD informations between SNPs (computed with writeLD or PLINK).
eSNPContain a EnrichSNP object for a list of SNPs (eSNP).
xSNPContain a EnrichSNP object for a extended list of SNPs (xSNP).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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