create_via_chebi: create_via_chebi

In michaelwitting/wormLipidPredictR: Lipid reaction prediction based on WormJam

create_via_chebi

Description

Creates ...

Usage

create_via_chebi(rhea_reactions_order, rhea_reactions)

Arguments

rhea_reactions_order	data.frame
rhea_reactions	data.frame

Details

Uses ...

Author(s)

Thomas Naake, [e-mail]

Examples

## load rhea_reactions_order
file <- file.path(
    path.package("LipidNetworkPredictR"), "extdata", "rhea_reactions.tsv",
    fsep = .Platform$file.sep)
rhea_reactions_order <- read.table(file, sep = "\t", header = TRUE)
rhea_reactions_order <- rhea_reactions_order[c(1, 5, 9), ]

## load rhea_reactions
file <- file.path(
    path.package("LipidNetworkPredictR"), "extdata", "rhea-reactions.txt",
    fsep = .Platform$file.sep)
rhea_reactions <- read.table(file, sep = "\t", header = FALSE, quote = "")

## run function
create_via_chebi(rhea_reactions_order = rhea_reactions_order, 
    rhea_reactions = rhea_reactions)

michaelwitting/wormLipidPredictR documentation built on Nov. 24, 2024, 5:39 p.m.