getRheaIDsFromProteinID: Get RHEA IDs from protein ID

In michaelwitting/wormLipidPredictR: Lipid reaction prediction based on WormJam

Get RHEA IDs from protein ID

Description

The function getRheaIDsFromProteinID returns associated RHEA IDs for a given UNIPROT ID. The function will accept IDs in the form of UNIPROT IDs corresponding to the 'Entry' column in Uniprot, e.g. "Q920L6" for fatty acid synthase from Rattus norvegicus or "Q9H5J4" for fatty acid synthase from Homo sapiens.

Usage

getRheaIDsFromProteinID(protein_id)

Arguments

protein_id

character(1), UNIPROT ID, e.g. "Q9H5J4"

Details

The function will return an error if the protein ID is not found in UNIPROT. The error might be linked to internet connection problems or because the protein ID is incorrect.

Value

vector

Author(s)

Thomas Naake, [e-mail]

Examples

protein_id <- "Q920L6"
## Not run: LipidNetworkPredictR:::getRheaIDsFromProteinID(protein_id)

michaelwitting/wormLipidPredictR documentation built on July 1, 2023, 9:20 p.m.