binarize: Binarize digital PCR data
In michbur/dpcR: Digital PCR Analysis

binarize

R Documentation

Binarize digital PCR data

Description

Transforms multinomial (number of molecules per partition) or continuous (fluorescence) digital PCR data to binary (positive/negative partition) format.

Usage

binarize(input)

Arguments

input

object of the class adpcr or dpcr with one of following types:"ct", "fluo" or "nm".

Value

object of the class adpcr or dpcr (depending on input) with type "np".

Author(s)

Michal Burdukiewicz.

Examples


# adpcr object
rand_array <- sim_adpcr(200, 300, 100, pos_sums = FALSE, n_panels = 1)
binarize(rand_array)

# dpcr object
rand_droplets <- sim_dpcr(200, 300, 100, pos_sums = FALSE, n_exp = 1)
binarize(rand_droplets)

michbur/dpcR documentation built on Nov. 17, 2022, 5:02 a.m.