dominant: Dominant taxa
In microbiome/microbiome: Microbiome Analytics
dominant R Documentation
Dominant taxa
Description
Returns the dominant taxonomic group for each sample.
Usage
dominant(x, level = NULL)
Arguments
x
A phyloseq-class object
level
Optional. Taxonomic level.
Value
A vector of dominance indices
Author(s)
Leo Lahti microbiome-admin@googlegroups.com
Examples
data(dietswap)
# vector
d <- dominant(dietswap)
microbiome/microbiome documentation built on Aug. 22, 2023, 7:12 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| dominant | R Documentation |
Dominant taxa
Description
Returns the dominant taxonomic group for each sample.
Usage
dominant(x, level = NULL)
Arguments
x |
A |
level |
Optional. Taxonomic level. |
Value
A vector of dominance indices
Author(s)
Leo Lahti microbiome-admin@googlegroups.com
Examples
data(dietswap)
# vector
d <- dominant(dietswap)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.