binRegions: Bin a set of GRanges regions
In mireia-bioinfo/meowmics: What the Package Does (One Line, Title Case)
View source: R/enrichmentTSS.R
binRegions R Documentation
Bin a set of GRanges regions
Description
Bin a set of GRanges regions
Usage
binRegions(regions, scope = 2000, bin = 10)
Arguments
regions
GRanges object containing the regions to bin. It assumes that
the first mcol contained the unique identifier of the region.
scope
Integer indicating how many base pairs upstream and downstream
to extend the promoter region. Returned window width will be scope*2.
Default: 2Kb.
bin
Integer indicating the size of the bins. Default: 10 bp.
Value
Binned GRanges object.
mireia-bioinfo/meowmics documentation built on July 29, 2023, 10 p.m.
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View source: R/enrichmentTSS.R
| binRegions | R Documentation |
Bin a set of GRanges regions
Description
Bin a set of GRanges regions
Usage
binRegions(regions, scope = 2000, bin = 10)
Arguments
regions |
GRanges object containing the regions to bin. It assumes that the first mcol contained the unique identifier of the region. |
scope |
Integer indicating how many base pairs upstream and downstream to extend the promoter region. Returned window width will be scope*2. Default: 2Kb. |
bin |
Integer indicating the size of the bins. Default: 10 bp. |
Value
Binned GRanges object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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