jaccardScore: Calculate Jaccard Scores between a list of peaks
In mireia-bioinfo/meowmics: What the Package Does (One Line, Title Case)
jaccardScore R Documentation
Calculate Jaccard Scores between a list of peaks
Description
Calculate Jaccard Scores between a list of peaks
Usage
jaccardScore(peaks, cores = 8)
Arguments
peaks
List of GRanges objects representing different sets of peaks.
cores
Number of threads to use for obtaining overlaps.
Value
A data.frame containing the different comparisons between peaks and
the Jaccard Scores, as calculated by bedtools. As a result, the final
statistic ranges from 0.0 to 1.0, where 0.0 represents no overlap and 1.0
represent complete overlap.
mireia-bioinfo/meowmics documentation built on July 29, 2023, 10 p.m.
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| jaccardScore | R Documentation |
Calculate Jaccard Scores between a list of peaks
Description
Calculate Jaccard Scores between a list of peaks
Usage
jaccardScore(peaks, cores = 8)
Arguments
peaks |
List of GRanges objects representing different sets of peaks. |
cores |
Number of threads to use for obtaining overlaps. |
Value
A data.frame containing the different comparisons between peaks and the Jaccard Scores, as calculated by bedtools. As a result, the final statistic ranges from 0.0 to 1.0, where 0.0 represents no overlap and 1.0 represent complete overlap.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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