View source: R/GET-get_subseting_pathway.R View source: R/GET-get_subset_pathway.R
get_subset_pathway | R Documentation |
reads the output of the mapping_ko function to filter out KOs based on pathways.
get_subset_pathway(mapped_ko_table, type_of_interest_feature,
interest_feature)
mapped_ko_table |
a data frame object. The output table from the mapping_ko function. |
type_of_interest_feature |
is a mapped_ko column name. This feature is going to be used for subsetting. |
interest_feature |
a character vector of the mapped_ko feature of interest. It is found under the type_of_interest_feature value column. |
This function is part of a package used for the analysis of bins metabolism.
get_subset_pathway(mapped_ko_table=ko_bin_mapp,
type_of_interest_feature=rbims_pathway, interest_feature="Hexadecane")
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.