GetCellMetric: Get metric of pseudotime
In mkarikom/RSoptSC: Low-Rank Factorization for Subspace-clustering
GetCellMetric R Documentation
Get metric of pseudotime
Description
Measure pseudotime from the given cell to its cluster partners.
Usage
GetCellMetric(cell_order_by, cell_id, cluster_id, cluster_labels, dist_graph)
Arguments
cell_order_by
cell-wise pseudotime parameter for measuring cluster/cell rank correlation
cell_id
the cell to measure from
cluster_id
the cluster of the cell
cluster_labels
the cluster label for each cell
dist_graph
a distance matrix of cells embedded in a graph
Value
the mean distance (by given metric) from the given cell
mkarikom/RSoptSC documentation built on May 10, 2023, 1:10 a.m.
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| GetCellMetric | R Documentation |
Get metric of pseudotime
Description
Measure pseudotime from the given cell to its cluster partners.
Usage
GetCellMetric(cell_order_by, cell_id, cluster_id, cluster_labels, dist_graph)
Arguments
cell_order_by |
cell-wise pseudotime parameter for measuring cluster/cell rank correlation |
cell_id |
the cell to measure from |
cluster_id |
the cluster of the cell |
cluster_labels |
the cluster label for each cell |
dist_graph |
a distance matrix of cells embedded in a graph |
Value
the mean distance (by given metric) from the given cell
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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