computeM | R Documentation |
Compute cell-to-cell similarity matrix by solving the following optimization problem via ADMM
min_{Z,E} ||Z||_* + lambda ||E||_{2,1}\\
s.t. X = XZ + E\\
Z'1 = 1\\
Z_{i,j} = 0 for (i,j) \in Omega
computeM(D, X, lambda)
D |
the unweighted KNN adjacency matrix |
X |
normalized sample vectors |
lambda |
the balance term between the rank of Z and the error |
a list containing the low rank approximation of X and manifold learning error
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