check_drug_targets_in_layers: Check drug target and layer data

In molnet-org/molnet: Predicting Differential Drug Response using Multi-Omics Networks

Description

(INTERNAL) Checks if the parameters supplied in 'drug_target_interaction' makes sense in the context of the defined layers.

Usage

check_drug_targets_in_layers(drug_target_interaction, layers)

Arguments

drug_target_interaction	A named list of the drug interaction data. Created by make_drug_target
layers	List of layers to check. Individual layers are created by make_layer and need to be wrapped in a list.

Value

Character string vector containing error messages.

Examples

data(layers_example)
layers <- layers_example
data(drug_gene_interactions)
drug_target_interaction <- make_drug_target(target_molecules='protein',
interaction_table=drug_gene_interactions,
match_on='gene_name')
return_errors(check_drug_targets_in_layers(drug_target_interaction, layers))

molnet-org/molnet documentation built on Dec. 21, 2021, 8:59 p.m.