Description Usage Format Source
Exemplary intermediate pipeline output: Combined graphs example data built by
generate_combined_graphs
. Graphs were created with default settings of
molnet_settings
. A subset of the original data by Krug et al., 2020 and randomly
sampled metabolite data was used to generate graphs layers_example
. They were
created from data stratified by estrogen receptor (ER) status: group1 contains data of ER+
patients and group2 of ER- patients.
1 |
A named list with 2 items.
A named list with two groups.
Graph associated with group1
Graph associated with group2
A named list containing data frames of mappings of assigned node IDs to the user-provided component identifiers for nodes in group1 or group2 and all nodes
Krug, Karsten et al. “Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy.” Cell vol. 183,5 (2020): 1436-1456.e31. doi:10.1016/j.cell.2020.10.036
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