FlowOutput-class: Class representing the wiring of a regexp on a job output...

In mskilab/Flow: Workflow and task management for genomics pipelines.

Class representing the wiring of a regexp on a job output directory to an output annotation S4 class for FlowOutput Class FlowOutputis a simple container for capturing output from Tasks which consists of name (of output annotation) and pattern (to match the output path in the task's output directory)

Description

Class representing the wiring of a regexp on a job output directory to an output annotation S4 class for FlowOutput

Class FlowOutputis a simple container for capturing output from Tasks which consists of name (of output annotation) and pattern (to match the output path in the task's output directory)

Slots

name

scalar character specifying annotation to write

pattern

scalar character regexp pattern to match the file in the output directory

mskilab/Flow documentation built on Jan. 12, 2023, 8:31 a.m.