API for mskilab/Flow
Workflow and task management for genomics pipelines.

Global functions
.jname	Source code
.parse.info	Source code
.update_cmd	Source code
Flow	Man page
Flow-class	Man page
FlowAnnotation	Man page Source code
FlowAnnotation-class	Man page
FlowLiteral	Man page Source code
FlowLiteral-class	Man page
FlowOutput	Man page Source code
FlowOutput-class	Man page
Job	Man page Source code
Job-class	Man page
Module	Man page Source code
Module-class	Man page
Slurmize	Man page
Task	Man page Source code
Task-class	Man page
[	Man page
[,Job-class	Man page
[.Flow	Man page
[<-	Man page
as.character	Man page
bcmd	Man page
bjobs	Man page
bkill	Man page
brun	Man page
bsub_cmd	Man page Source code
c	Man page
cache	Man page
chmod	Man page
cmd	Man page
cores	Man page
cores<-	Man page
dedup	Man page Source code Source code
dirs	Man page
entities	Man page
err	Man page
file.dir	Man page Source code Source code
file.name	Man page Source code Source code
gres	Man page
gres<-	Man page
ids	Man page
inputs	Man page
io_c	Man page
io_c<-	Man page
io_n	Man page
io_n<-	Man page
jname	Man page
key	Man page
length	Man page
make_chunks	Source code
mem	Man page
mem<-	Man page
merge	Man page
merge,Job-class	Man page
module	Man page
module-task	Man page
more	Man page Source code Source code
nice_val	Man page
nice_val<-	Man page
normalizePath	Man page
now	Man page
now<-	Man page
out	Man page
outdir	Man page
outputs	Man page
parse.info	Man page Source code
plot.Flow	Man page
purge	Man page
qcmd	Man page
qjobs	Man page
qkill	Man page
qos<-	Man page
qprior	Man page
qprior<-	Man page
qrun	Man page
qsub_cmd	Man page Source code
queue	Man page
queue<-	Man page
readLines	Source code
refresh	Man page
report	Man page
reset.job	Man page Source code
rrbind	Man page Source code
run	Man page
runinfo	Man page
scmd	Man page
setwd	Man page
setwd.Job	Man page
silent	Man page Source code
sjobs	Man page
skill	Man page
sniff	Man page
srun	Man page
ssub_cmd	Man page Source code
status	Man page
status.info	Man page
tailf	Man page Source code Source code
task	Man page
tasks	Man page
time	Man page
time<-	Man page
try2	Source code
update	Man page
viewtask	Man page Source code
xml2task	Man page Source code Source code