gr.sum: gr.sum
In mskilab/gUtils: R Package Providing Additional Capabilities and Speed for GenomicRanges Operations
gr.sum R Documentation
gr.sum
Description
Sums GRanges either by doing coverage and either weighting them equally
or using a field "weight". Will return either sum or average.
Usage
gr.sum(gr, field = NULL, mean = FALSE)
Arguments
gr
GRanges to sum
field
metadata field from gr to use as a weight
mean
logical scalar specifying whether to divide the output at each interval but the total number of intervals overlapping it (only applies if field == NULL) (default FALSE)
Value
non-overlapping GRanges spanning the seqlengths of gr with $score (if field is NULL) or $field specifying the sum / mean at that position
mskilab/gUtils documentation built on June 6, 2023, 12:08 a.m.
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| gr.sum | R Documentation |
gr.sum
Description
Sums GRanges either by doing coverage and either weighting them equally or using a field "weight". Will return either sum or average.
Usage
gr.sum(gr, field = NULL, mean = FALSE)
Arguments
gr |
|
field |
metadata field from gr to use as a weight |
mean |
logical scalar specifying whether to divide the output at each interval but the total number of intervals overlapping it (only applies if field == NULL) (default FALSE) |
Value
non-overlapping GRanges spanning the seqlengths of gr with $score (if field is NULL) or $field specifying the sum / mean at that position
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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