streduce: Reduce 'GRanges' and 'GRangesList' to miminal footprint
In mskilab/gUtils: R Package Providing Additional Capabilities and Speed for GenomicRanges Operations
streduce R Documentation
Reduce GRanges and GRangesList to miminal footprint
Description
Reduce GRanges and GRangesList to miminal footprint
Shortcut for reduce(sort(gr.stripstrand(unlist(x))))
Usage
streduce(gr, pad = 0, sort = TRUE)
Arguments
gr
GRanges or GRangesList
pad
integer Expand the input data before reducing. (default = 0)
sort
boolean Flag to sort the output. (default = TRUE)
Value
GRanges object with no strand information, representing a minimal footprint
Examples
streduce(grl.hiC, pad=10)
streduce(example_genes, pad=1000)
mskilab/gUtils documentation built on June 6, 2023, 12:08 a.m.
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| streduce | R Documentation |
Reduce GRanges and GRangesList to miminal footprint
Description
Reduce GRanges and GRangesList to miminal footprint
Shortcut for reduce(sort(gr.stripstrand(unlist(x))))
Usage
streduce(gr, pad = 0, sort = TRUE)
Arguments
gr |
|
pad |
integer Expand the input data before reducing. (default = 0) |
sort |
boolean Flag to sort the output. (default = TRUE) |
Value
GRanges object with no strand information, representing a minimal footprint
Examples
streduce(grl.hiC, pad=10)
streduce(example_genes, pad=1000)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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