project.plot: project.plot
In mtmcgowan/GGcall: Clusters Infinium SNP chip data in polyploid species and calls genotypes
Description
Usage
Arguments
Value
Description
Plots the clustering results for a marker object. Includes elipses to indicate distribution variance/rotation.
Usage
1
project.plot(project, indices = NULL, save.loc = getwd(), recast = F)
Arguments
project
a project object, markers should already be clustered
indices
A numerical index of the markers to plot
save.loc
A string path to the folder to save the images
recast
Logical, should raw data be recast to polar theta and r coordinates?
Value
Nothing
This function relies on the following packages:
ggplot2, car, RColorBrewer, stringr
mtmcgowan/GGcall documentation built on July 1, 2021, 4:14 a.m.
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Description Usage Arguments Value
Description
Plots the clustering results for a marker object. Includes elipses to indicate distribution variance/rotation.
Usage
1 | project.plot(project, indices = NULL, save.loc = getwd(), recast = F)
|
Arguments
project |
a project object, markers should already be clustered |
indices |
A numerical index of the markers to plot |
save.loc |
A string path to the folder to save the images |
recast |
Logical, should raw data be recast to polar theta and r coordinates? |
Value
Nothing
This function relies on the following packages: ggplot2, car, RColorBrewer, stringr
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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