GSE9891: Novel molecular subtypes of serous and endometrioid ovarian...
In mzon7/MetaGxOvarian: Transcriptomic Ovarian Cancer Datasets
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Description
The study aim to identify novel molecular subtypes of ovarian cancer by gene expression profiling with linkage to clinical and pathologic features.Microarray gene expression profiling was done on 285 serous and endometrioid tumors of the ovary, peritoneum, and fallopian tube. K-means clustering was applied to identify robust molecular subtypes. Statistical analysis identified differentially expressed genes, pathways, and gene ontologies. Laser capture microdissection, pathology review, and immunohistochemistry validated the array-based findings. Patient survival within k-means groups was evaluated using Cox proportional hazards models. Class prediction validated k-means groups in an independent dataset. A semisupervised survival analysis of the array data was used to compare against unsupervised clustering results.Optimal clustering of array data identified six molecular subtypes. Two subtypes represented predominantly serous low malignant potential and low-grade endometrioid subtypes, respectively. The remaining four subtypes represented higher grade and advanced stage cancers of serous and endometrioid morphology. A novel subtype of high-grade serous cancers reflected a mesenchymal cell type, characterized by overexpression of N-cadherin and P-cadherin and low expression of differentiation markers, including CA125 and MUC1. A poor prognosis subtype was defined by a reactive stroma gene expression signature, correlating with extensive desmoplasia in such samples. A similar poor prognosis signature could be found using a semisupervised analysis. Each subtype displayed distinct levels and patterns of immune cell infiltration. Class prediction identified similar subtypes in an independent ovarian dataset with similar prognostic trends.Gene expression profiling identified molecular subtypes of ovarian cancer of biological and clinical importance.
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experimentData(eset):
Experiment data
Experimenter name: Tothill RW, Tinker AV, George J, Brown R, Fox SB, Lade S, Johnson DS, Trivett MK, Etemadmoghadam D, Locandro B, Traficante N, Fereday S, Hung JA, Chiew YE, Haviv I, Gertig D, DeFazio A, Bowtell DD.Novel molecular subtypes of serous and endometrioid ovarian cancer linked to clinical outcome. Clin Cancer Res. 2008 Aug 15; 14(16):5198-208.
Laboratory: Tothill, Bowtell 2008
Contact information:
Title: Novel molecular subtypes of serous and endometrioid ovarian cancer linked to clinical outcome.
URL:
PMIDs: 18698038
Abstract: A 243 word abstract is available. Use 'abstract' method.
Information is available on: preprocessing
notes:
platform_title:
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
platform_shorttitle:
Affymetrix HG-U133Plus2
platform_summary:
hgu133plus2
platform_manufacturer:
Affymetrix
platform_distribution:
commercial
platform_accession:
GPL570
version:
2015-09-22 20:16:32
featureData(eset):
An object of class 'AnnotatedDataFrame'
featureNames: 1007_s_at 1053_at ... AFFX-HUMISGF3A/M97935_MB_at
(42447 total)
varLabels: probeset gene EntrezGene.ID best_probe
varMetadata: labelDescription
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assayData: 42447 features, 285 samples
Platform type:
Overall survival time-to-event summary (in years):
Call: survfit(formula = Surv(time, cens) ~ -1)
7 observations deleted due to missingness
n events median 0.95LCL 0.95UCL
278.00 113.00 3.95 3.53 5.01
---------------------------
Available sample meta-data:
---------------------------
alt_sample_name:
X129 X146 X152 X20019 X20025 X20027 X20031 X20032 X20041 X20046
1 1 1 1 1 1 1 1 1 1
X20074 X22002 X22012 X22013 X22020 X22023 X22027 X22029 X22031 X22037
1 1 1 1 1 1 1 1 1 1
X22046 X22047 X22048 X22057 X22058 X2219 X2227 X23026 X23030 X23036
1 1 1 1 1 1 1 1 1 1
X23043 X23052 X23053 X23055 X23066 X23070 X23074 X23077 X23084 X23098
1 1 1 1 1 1 1 1 1 1
X23102 X23106 X23116 X23128 X23139 X23143 X23162 X23165 X23167 X23170
1 1 1 1 1 1 1 1 1 1
X23172 X23177 X23178 X23182 X23187 X23197 X23202 X23204 X23210 X23212
1 1 1 1 1 1 1 1 1 1
X23213 X23221 X26047 X261 X27006 X27098 X32013 X32022 X32032 X32034
1 1 1 1 1 1 1 1 1 1
X32048 X32049 X32054 X32055 X32089 X32098 X32103 X32117 X34019 X34049
1 1 1 1 1 1 1 1 1 1
X34066 X34078 X34080 X34085 X34086 X34090 X34102 X34103 X34111 X34113
1 1 1 1 1 1 1 1 1 1
X34117 X34125 X34165 X34168 X34172 X34186 X34202 X34207 X34801 (Other)
1 1 1 1 1 1 1 1 1 186
sample_type:
tumor
285
histological_type:
endo other ser
20 1 264
primarysite:
ft other ov
8 34 243
arrayedsite:
ft other ov
2 83 200
summarygrade:
high low NA's
163 116 6
summarystage:
early late NA's
42 240 3
tumorstage:
1 2 3 4 NA's
24 18 218 22 3
substage:
a b c NA's
26 19 212 28
grade:
1 2 3 NA's
19 97 163 6
age_at_initial_pathologic_diagnosis:
Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
22.00 53.00 59.00 59.62 68.00 80.00 3
pltx:
n y NA's
39 243 3
tax:
n y NA's
87 195 3
neo:
n y NA's
264 18 3
days_to_tumor_recurrence:
Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
0.0 300.0 450.0 618.9 810.0 4980.0 10
recurrence_status:
norecurrence recurrence NA's
94 188 3
days_to_death:
Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
0.0 547.5 855.0 955.1 1252.0 6420.0 7
vital_status:
deceased living NA's
113 169 3
debulking:
optimal suboptimal NA's
160 88 37
batch:
2004-12-03 2004-12-23 2005-01-12 2005-01-17 2005-01-24 2005-01-31 2005-02-21
3 4 7 7 8 10 10
2005-03-17 2005-05-05 2005-05-09 2005-05-25 2005-05-27 2005-05-30 2005-06-02
2 1 1 2 3 3 6
2005-06-06 2005-06-08 2005-06-16 2005-06-17 2005-06-24 2005-07-06 2005-07-15
4 5 3 5 6 2 9
2005-07-20 2005-07-29 2005-08-03 2005-08-05 2005-08-18 2005-08-24 2005-08-26
7 5 6 3 4 8 4
2005-09-09 2005-09-14 2005-09-16 2005-09-21 2005-10-05 2005-10-26 2005-10-28
4 6 6 4 5 2 4
2005-11-04 2005-11-09 2005-11-11 2005-11-23 2005-12-15 2005-12-21 2006-01-20
6 3 7 4 7 8 3
2006-01-31 2006-02-08 2006-02-28 2006-04-05 2006-04-06 2006-04-12 2006-04-13
7 3 3 7 3 7 4
2006-04-28 2006-05-03 2006-06-06 2006-06-07 2006-06-22 2006-07-07 2006-07-19
6 9 6 3 9 4 7
uncurated_author_metadata:
title: X129///geo_accession: GSM250001///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM250nnn/GSM250001/GSM250001.CEL.gz///data_row_count: 54621///ID: X129///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 65///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 7///TimeToDeathorLastFollow.Up.Months.: 15///ResidualDisease: >1///ArrayedSite: PE
1
title: X146///geo_accession: GSM250000///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : III///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM250nnn/GSM250000/GSM250000.CEL.gz///data_row_count: 54621///ID: X146///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 56///PatientStatus: PF///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 166///TimeToDeathorLastFollow.Up.Months.: 166///ResidualDisease: >1///ArrayedSite: OV
1
title: X152///geo_accession: GSM249999///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249999/GSM249999.CEL.gz///data_row_count: 54621///ID: X152///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 49///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 18///TimeToDeathorLastFollow.Up.Months.: 81///ResidualDisease: macrosizeNK///ArrayedSite: OV
1
title: X20019///geo_accession: GSM249998///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249998/GSM249998.CEL.gz///data_row_count: 54621///ID: X20019///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 3///PatientAge.Years.: 58///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: NA///TimeToDeathorLastFollow.Up.Months.: NA///ResidualDisease: >1///ArrayedSite: OV
1
title: X20025///geo_accession: GSM249997///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249997/GSM249997.CEL.gz///data_row_count: 54621///ID: X20025///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 80///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 12///TimeToDeathorLastFollow.Up.Months.: 43///ResidualDisease: nil///ArrayedSite: PE
1
title: X20027///geo_accession: GSM249996///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249996/GSM249996.CEL.gz///data_row_count: 54621///ID: X20027///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 71///PatientStatus: D*///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 1///TimeToDeathorLastFollow.Up.Months.: 1///ResidualDisease: <1///ArrayedSite: OV
1
title: X20031///geo_accession: GSM249995///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249995/GSM249995.CEL.gz///data_row_count: 54621///ID: X20031///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: II///Grade: 2///PatientAge.Years.: 56///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 30///TimeToDeathorLastFollow.Up.Months.: 43///ResidualDisease: nil///ArrayedSite: OV
1
title: X20032///geo_accession: GSM249994///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IV///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249994/GSM249994.CEL.gz///data_row_count: 54621///ID: X20032///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: IV///Grade: 2///PatientAge.Years.: 63///PatientStatus: D///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 15///ResidualDisease: <1///ArrayedSite: OV
1
title: X20041///geo_accession: GSM249993///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249993/GSM249993.CEL.gz///data_row_count: 54621///ID: X20041///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 3///PatientAge.Years.: 43///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 37///TimeToDeathorLastFollow.Up.Months.: 37///ResidualDisease: nil///ArrayedSite: OV
1
title: X20046///geo_accession: GSM249992///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIA///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249992/GSM249992.CEL.gz///data_row_count: 54621///ID: X20046///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 65///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 33///TimeToDeathorLastFollow.Up.Months.: 33///ResidualDisease: nil///ArrayedSite: OV
1
title: X20074///geo_accession: GSM249991///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Fallopian///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIB///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249991/GSM249991.CEL.gz///data_row_count: 54621///ID: X20074///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: FT///FIGOStage: III///Grade: 3///PatientAge.Years.: 58///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 27///TimeToDeathorLastFollow.Up.Months.: 31///ResidualDisease: nil///ArrayedSite: CO
1
title: X22002///geo_accession: GSM249728///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIB///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249728/GSM249728.CEL.gz///data_row_count: 54621///ID: X22002///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 72///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 36///TimeToDeathorLastFollow.Up.Months.: 36///ResidualDisease: nil///ArrayedSite: OV
1
title: X22012///geo_accession: GSM249990///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249990/GSM249990.CEL.gz///data_row_count: 54621///ID: X22012///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 50///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 27///TimeToDeathorLastFollow.Up.Months.: 43///ResidualDisease: >1///ArrayedSite: OV
1
title: X22013///geo_accession: GSM249989///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIA///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249989/GSM249989.CEL.gz///data_row_count: 54621///ID: X22013///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 2///PatientAge.Years.: 55///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 47///TimeToDeathorLastFollow.Up.Months.: 47///ResidualDisease: <1///ArrayedSite: CO
1
title: X22020///geo_accession: GSM249988///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249988/GSM249988.CEL.gz///data_row_count: 54621///ID: X22020///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 41///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 9///TimeToDeathorLastFollow.Up.Months.: 12///ResidualDisease: >1///ArrayedSite: OV
1
title: X22023///geo_accession: GSM249987///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249987/GSM249987.CEL.gz///data_row_count: 54621///ID: X22023///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 46///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 41///TimeToDeathorLastFollow.Up.Months.: 41///ResidualDisease: >1///ArrayedSite: OV
1
title: X22027///geo_accession: GSM249725///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIA///characteristics_ch1.4: Consolidated.Grade : 1///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249725/GSM249725.CEL.gz///data_row_count: 54621///ID: X22027///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 1///PatientAge.Years.: 47///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 44///TimeToDeathorLastFollow.Up.Months.: 44///ResidualDisease: nil///ArrayedSite: OV
1
title: X22029///geo_accession: GSM249986///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IV///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249986/GSM249986.CEL.gz///data_row_count: 54621///ID: X22029///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: IV///Grade: 3///PatientAge.Years.: 58///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 18///TimeToDeathorLastFollow.Up.Months.: 19///ResidualDisease: >1///ArrayedSite: OV
1
title: X22031///geo_accession: GSM249985///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249985/GSM249985.CEL.gz///data_row_count: 54621///ID: X22031///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 58///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 42///TimeToDeathorLastFollow.Up.Months.: 42///ResidualDisease: <1///ArrayedSite: OV
1
title: X22037///geo_accession: GSM249984///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249984/GSM249984.CEL.gz///data_row_count: 54621///ID: X22037///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 78///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 8///TimeToDeathorLastFollow.Up.Months.: 17///ResidualDisease: >1///ArrayedSite: PE
1
title: X22046///geo_accession: GSM249983///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249983/GSM249983.CEL.gz///data_row_count: 54621///ID: X22046///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 71///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 10///TimeToDeathorLastFollow.Up.Months.: 14///ResidualDisease: >1///ArrayedSite: OV
1
title: X22047///geo_accession: GSM249982///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249982/GSM249982.CEL.gz///data_row_count: 54621///ID: X22047///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 45///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 9///TimeToDeathorLastFollow.Up.Months.: 22///ResidualDisease: >1///ArrayedSite: OV
1
title: X22048///geo_accession: GSM249981///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249981/GSM249981.CEL.gz///data_row_count: 54621///ID: X22048///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 2///PatientAge.Years.: 70///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 35///TimeToDeathorLastFollow.Up.Months.: 35///ResidualDisease: nil///ArrayedSite: OV
1
title: X22057///geo_accession: GSM249980///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249980/GSM249980.CEL.gz///data_row_count: 54621///ID: X22057///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 60///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 23///TimeToDeathorLastFollow.Up.Months.: 23///ResidualDisease: nil///ArrayedSite: PE
1
title: X22058///geo_accession: GSM249979///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IV///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249979/GSM249979.CEL.gz///data_row_count: 54621///ID: X22058///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: IV///Grade: 3///PatientAge.Years.: 45///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 7///TimeToDeathorLastFollow.Up.Months.: 9///ResidualDisease: <1///ArrayedSite: PE
1
title: X2219///geo_accession: GSM249978///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : NA///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249978/GSM249978.CEL.gz///data_row_count: 54621///ID: X2219///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: 3///Grade: NA///PatientAge.Years.: NA///PatientStatus: ///Pltx: ///Tax: ///Neo: ///TimeToRelapseorLastFollow.Up.Months.: NA///TimeToDeathorLastFollow.Up.Months.: NA///ResidualDisease: NK///ArrayedSite: Other
1
title: X2227///geo_accession: GSM249977///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : NA///characteristics_ch1.4: Consolidated.Grade : NA///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249977/GSM249977.CEL.gz///data_row_count: 54621///ID: X2227///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: ///Grade: NA///PatientAge.Years.: NA///PatientStatus: ///Pltx: ///Tax: ///Neo: ///TimeToRelapseorLastFollow.Up.Months.: NA///TimeToDeathorLastFollow.Up.Months.: NA///ResidualDisease: NK///ArrayedSite: Other
1
title: X23026///geo_accession: GSM249976///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249976/GSM249976.CEL.gz///data_row_count: 54621///ID: X23026///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 57///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 13///TimeToDeathorLastFollow.Up.Months.: 36///ResidualDisease: NK///ArrayedSite: OV
1
title: X23030///geo_accession: GSM249975///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249975/GSM249975.CEL.gz///data_row_count: 54621///ID: X23030///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 67///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 19///TimeToDeathorLastFollow.Up.Months.: 44///ResidualDisease: <1///ArrayedSite: OV
1
title: X23036///geo_accession: GSM249727///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249727/GSM249727.CEL.gz///data_row_count: 54621///ID: X23036///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 40///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 39///TimeToDeathorLastFollow.Up.Months.: 39///ResidualDisease: nil///ArrayedSite: OV
1
title: X23043///geo_accession: GSM249974///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249974/GSM249974.CEL.gz///data_row_count: 54621///ID: X23043///k.meansGroup: 6///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: II///Grade: 2///PatientAge.Years.: 43///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 43///TimeToDeathorLastFollow.Up.Months.: 43///ResidualDisease: nil///ArrayedSite: OV
1
title: X23052///geo_accession: GSM249721///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IA///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249721/GSM249721.CEL.gz///data_row_count: 54621///ID: X23052///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: I///Grade: 3///PatientAge.Years.: 46///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 22///TimeToDeathorLastFollow.Up.Months.: 22///ResidualDisease: nil///ArrayedSite: OV
1
title: X23053///geo_accession: GSM249973///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249973/GSM249973.CEL.gz///data_row_count: 54621///ID: X23053///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 73///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 21///TimeToDeathorLastFollow.Up.Months.: 41///ResidualDisease: >1///ArrayedSite: OV
1
title: X23055///geo_accession: GSM249972///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249972/GSM249972.CEL.gz///data_row_count: 54621///ID: X23055///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 57///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 15///TimeToDeathorLastFollow.Up.Months.: 31///ResidualDisease: <1///ArrayedSite: OV
1
title: X23066///geo_accession: GSM249716///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIA///characteristics_ch1.4: Consolidated.Grade : 1///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249716/GSM249716.CEL.gz///data_row_count: 54621///ID: X23066///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 1///PatientAge.Years.: 64///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 18///TimeToDeathorLastFollow.Up.Months.: 18///ResidualDisease: nil///ArrayedSite: OV
1
title: X23070///geo_accession: GSM249971///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IV///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249971/GSM249971.CEL.gz///data_row_count: 54621///ID: X23070///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: IV///Grade: 2///PatientAge.Years.: 48///PatientStatus: D///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 10///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: <1///ArrayedSite: OV
1
title: X23074///geo_accession: GSM249970///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Fallopian///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249970/GSM249970.CEL.gz///data_row_count: 54621///ID: X23074///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: FT///FIGOStage: I///Grade: 3///PatientAge.Years.: 77///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 20///TimeToDeathorLastFollow.Up.Months.: 20///ResidualDisease: nil///ArrayedSite: FT
1
title: X23077///geo_accession: GSM249969///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249969/GSM249969.CEL.gz///data_row_count: 54621///ID: X23077///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 58///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 7///TimeToDeathorLastFollow.Up.Months.: 35///ResidualDisease: >1///ArrayedSite: OV
1
title: X23084///geo_accession: GSM249968///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIB///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249968/GSM249968.CEL.gz///data_row_count: 54621///ID: X23084///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 59///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 22///TimeToDeathorLastFollow.Up.Months.: 28///ResidualDisease: <1///ArrayedSite: OV
1
title: X23098///geo_accession: GSM249967///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249967/GSM249967.CEL.gz///data_row_count: 54621///ID: X23098///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 2///PatientAge.Years.: 77///PatientStatus: PF///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 34///TimeToDeathorLastFollow.Up.Months.: 34///ResidualDisease: nil///ArrayedSite: OV
1
title: X23102///geo_accession: GSM249966///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : IIIB///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249966/GSM249966.CEL.gz///data_row_count: 54621///ID: X23102///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 49///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 33///TimeToDeathorLastFollow.Up.Months.: 33///ResidualDisease: nil///ArrayedSite: OV
1
title: X23106///geo_accession: GSM249965///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249965/GSM249965.CEL.gz///data_row_count: 54621///ID: X23106///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 78///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 11///ResidualDisease: macrosizeNK///ArrayedSite: OV
1
title: X23116///geo_accession: GSM249964///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249964/GSM249964.CEL.gz///data_row_count: 54621///ID: X23116///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 68///PatientStatus: D///Pltx: N///Tax: N///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 4///TimeToDeathorLastFollow.Up.Months.: 8///ResidualDisease: NK///ArrayedSite: PE
1
title: X23128///geo_accession: GSM249963///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249963/GSM249963.CEL.gz///data_row_count: 54621///ID: X23128///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 65///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 13///TimeToDeathorLastFollow.Up.Months.: 34///ResidualDisease: <1///ArrayedSite: PE
1
title: X23139///geo_accession: GSM249962///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249962/GSM249962.CEL.gz///data_row_count: 54621///ID: X23139///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 62///PatientStatus: R///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 9///TimeToDeathorLastFollow.Up.Months.: 31///ResidualDisease: nil///ArrayedSite: OV
1
title: X23143///geo_accession: GSM249961///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIB///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249961/GSM249961.CEL.gz///data_row_count: 54621///ID: X23143///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 57///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 24///TimeToDeathorLastFollow.Up.Months.: 29///ResidualDisease: <1///ArrayedSite: OV
1
title: X23162///geo_accession: GSM249960///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249960/GSM249960.CEL.gz///data_row_count: 54621///ID: X23162///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 46///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 24///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: nil///ArrayedSite: OV
1
title: X23165///geo_accession: GSM249959///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249959/GSM249959.CEL.gz///data_row_count: 54621///ID: X23165///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 62///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 17///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: <1///ArrayedSite: OV
1
title: X23167///geo_accession: GSM249958///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249958/GSM249958.CEL.gz///data_row_count: 54621///ID: X23167///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 59///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 12///TimeToDeathorLastFollow.Up.Months.: 21///ResidualDisease: <1///ArrayedSite: OV
1
title: X23170///geo_accession: GSM249957///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249957/GSM249957.CEL.gz///data_row_count: 54621///ID: X23170///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 49///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 12///TimeToDeathorLastFollow.Up.Months.: 12///ResidualDisease: <1///ArrayedSite: OV
1
title: X23172///geo_accession: GSM249956///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249956/GSM249956.CEL.gz///data_row_count: 54621///ID: X23172///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 59///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 8///TimeToDeathorLastFollow.Up.Months.: 16///ResidualDisease: >1///ArrayedSite: OV
1
title: X23177///geo_accession: GSM249720///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249720/GSM249720.CEL.gz///data_row_count: 54621///ID: X23177///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: I///Grade: 3///PatientAge.Years.: 52///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 23///TimeToDeathorLastFollow.Up.Months.: 23///ResidualDisease: nil///ArrayedSite: OV
1
title: X23178///geo_accession: GSM249955///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249955/GSM249955.CEL.gz///data_row_count: 54621///ID: X23178///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 49///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 13///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: <1///ArrayedSite: OV
1
title: X23182///geo_accession: GSM249954///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249954/GSM249954.CEL.gz///data_row_count: 54621///ID: X23182///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 2///PatientAge.Years.: 73///PatientStatus: PF///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 18///TimeToDeathorLastFollow.Up.Months.: 18///ResidualDisease: nil///ArrayedSite: OV
1
title: X23187///geo_accession: GSM249953///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249953/GSM249953.CEL.gz///data_row_count: 54621///ID: X23187///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 76///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 23///TimeToDeathorLastFollow.Up.Months.: 23///ResidualDisease: <1///ArrayedSite: OV
1
title: X23197///geo_accession: GSM249951///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249951/GSM249951.CEL.gz///data_row_count: 54621///ID: X23197///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 66///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 8///TimeToDeathorLastFollow.Up.Months.: 8///ResidualDisease: >1///ArrayedSite: OV
1
title: X23202///geo_accession: GSM249950///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249950/GSM249950.CEL.gz///data_row_count: 54621///ID: X23202///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 58///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 19///TimeToDeathorLastFollow.Up.Months.: 19///ResidualDisease: <1///ArrayedSite: OV
1
title: X23204///geo_accession: GSM249949///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Fallopian///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IA///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249949/GSM249949.CEL.gz///data_row_count: 54621///ID: X23204///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: FT///FIGOStage: I///Grade: 3///PatientAge.Years.: 67///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 10///TimeToDeathorLastFollow.Up.Months.: 10///ResidualDisease: nil///ArrayedSite: OV
1
title: X23210///geo_accession: GSM249948///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Adeno///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249948/GSM249948.CEL.gz///data_row_count: 54621///ID: X23210///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Adeno///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 62///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 18///TimeToDeathorLastFollow.Up.Months.: 20///ResidualDisease: <1///ArrayedSite: OV
1
title: X23212///geo_accession: GSM249947///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249947/GSM249947.CEL.gz///data_row_count: 54621///ID: X23212///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 2///PatientAge.Years.: 75///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 3///TimeToDeathorLastFollow.Up.Months.: 3///ResidualDisease: <1///ArrayedSite: PE
1
title: X23213///geo_accession: GSM249946///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 1///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249946/GSM249946.CEL.gz///data_row_count: 54621///ID: X23213///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 1///PatientAge.Years.: 58///PatientStatus: D///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 2///TimeToDeathorLastFollow.Up.Months.: 11///ResidualDisease: >1///ArrayedSite: PE
1
title: X23221///geo_accession: GSM249945///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249945/GSM249945.CEL.gz///data_row_count: 54621///ID: X23221///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 67///PatientStatus: R///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 4///TimeToDeathorLastFollow.Up.Months.: 18///ResidualDisease: <1///ArrayedSite: PE
1
title: X26047///geo_accession: GSM249944///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249944/GSM249944.CEL.gz///data_row_count: 54621///ID: X26047///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 2///PatientAge.Years.: 72///PatientStatus: R///Pltx: N///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 6///TimeToDeathorLastFollow.Up.Months.: 31///ResidualDisease: >1///ArrayedSite: PE
1
title: X261///geo_accession: GSM249943///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IV///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249943/GSM249943.CEL.gz///data_row_count: 54621///ID: X261///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: IV///Grade: 2///PatientAge.Years.: 55///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 6///TimeToDeathorLastFollow.Up.Months.: 13///ResidualDisease: >1///ArrayedSite: OV
1
title: X27006///geo_accession: GSM249942///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249942/GSM249942.CEL.gz///data_row_count: 54621///ID: X27006///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 73///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 23///ResidualDisease: <1///ArrayedSite: OV
1
title: X27098///geo_accession: GSM249941///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249941/GSM249941.CEL.gz///data_row_count: 54621///ID: X27098///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 61///PatientStatus: R///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 23///TimeToDeathorLastFollow.Up.Months.: 23///ResidualDisease: nil///ArrayedSite: OV
1
title: X32013///geo_accession: GSM249940///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249940/GSM249940.CEL.gz///data_row_count: 54621///ID: X32013///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 68///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 2///TimeToDeathorLastFollow.Up.Months.: 2///ResidualDisease: NK///ArrayedSite: OV
1
title: X32022///geo_accession: GSM249939///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249939/GSM249939.CEL.gz///data_row_count: 54621///ID: X32022///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 68///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 32///TimeToDeathorLastFollow.Up.Months.: 37///ResidualDisease: >1///ArrayedSite: OV
1
title: X32032///geo_accession: GSM249938///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Fallopian///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249938/GSM249938.CEL.gz///data_row_count: 54621///ID: X32032///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: FT///FIGOStage: II///Grade: 3///PatientAge.Years.: 60///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 35///TimeToDeathorLastFollow.Up.Months.: 35///ResidualDisease: nil///ArrayedSite: FT
1
title: X32034///geo_accession: GSM249937///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249937/GSM249937.CEL.gz///data_row_count: 54621///ID: X32034///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 58///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 11///ResidualDisease: >1///ArrayedSite: OV
1
title: X32048///geo_accession: GSM249936///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIA///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249936/GSM249936.CEL.gz///data_row_count: 54621///ID: X32048///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 69///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 41///TimeToDeathorLastFollow.Up.Months.: 41///ResidualDisease: nil///ArrayedSite: OV
1
title: X32049///geo_accession: GSM249935///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Fallopian///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249935/GSM249935.CEL.gz///data_row_count: 54621///ID: X32049///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: FT///FIGOStage: III///Grade: 3///PatientAge.Years.: 57///PatientStatus: R///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 29///ResidualDisease: >1///ArrayedSite: PE
1
title: X32054///geo_accession: GSM249934///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249934/GSM249934.CEL.gz///data_row_count: 54621///ID: X32054///k.meansGroup: 3///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 45///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 36///ResidualDisease: >1///ArrayedSite: OV
1
title: X32055///geo_accession: GSM249933///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IV///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249933/GSM249933.CEL.gz///data_row_count: 54621///ID: X32055///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: IV///Grade: 2///PatientAge.Years.: 59///PatientStatus: D///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 8///TimeToDeathorLastFollow.Up.Months.: 16///ResidualDisease: NK///ArrayedSite: OV
1
title: X32089///geo_accession: GSM249932///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249932/GSM249932.CEL.gz///data_row_count: 54621///ID: X32089///k.meansGroup: 3///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 49///PatientStatus: R///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 21///TimeToDeathorLastFollow.Up.Months.: 22///ResidualDisease: macrosizeNK///ArrayedSite: OV
1
title: X32098///geo_accession: GSM249931///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249931/GSM249931.CEL.gz///data_row_count: 54621///ID: X32098///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 2///PatientAge.Years.: 77///PatientStatus: D///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 1///TimeToDeathorLastFollow.Up.Months.: 1///ResidualDisease: >1///ArrayedSite: PE
1
title: X32103///geo_accession: GSM249930///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIA///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249930/GSM249930.CEL.gz///data_row_count: 54621///ID: X32103///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 75///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 19///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: nil///ArrayedSite: OV
1
title: X32117///geo_accession: GSM249715///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIA///characteristics_ch1.4: Consolidated.Grade : 1///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249715/GSM249715.CEL.gz///data_row_count: 54621///ID: X32117///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 1///PatientAge.Years.: 26///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 8///TimeToDeathorLastFollow.Up.Months.: 8///ResidualDisease: nil///ArrayedSite: OV
1
title: X34019///geo_accession: GSM249929///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249929/GSM249929.CEL.gz///data_row_count: 54621///ID: X34019///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 57///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 22///ResidualDisease: <1///ArrayedSite: OV
1
title: X34049///geo_accession: GSM249928///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IA///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249928/GSM249928.CEL.gz///data_row_count: 54621///ID: X34049///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: I///Grade: 3///PatientAge.Years.: 56///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 40///TimeToDeathorLastFollow.Up.Months.: 40///ResidualDisease: nil///ArrayedSite: OV
1
title: X34066///geo_accession: GSM249927///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249927/GSM249927.CEL.gz///data_row_count: 54621///ID: X34066///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 47///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 14///TimeToDeathorLastFollow.Up.Months.: 26///ResidualDisease: nil///ArrayedSite: OV
1
title: X34078///geo_accession: GSM249926///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249926/GSM249926.CEL.gz///data_row_count: 54621///ID: X34078///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 53///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 32///TimeToDeathorLastFollow.Up.Months.: 32///ResidualDisease: <1///ArrayedSite: OV
1
title: X34080///geo_accession: GSM249925///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249925/GSM249925.CEL.gz///data_row_count: 54621///ID: X34080///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 60///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 10///TimeToDeathorLastFollow.Up.Months.: 14///ResidualDisease: <1///ArrayedSite: PE
1
title: X34085///geo_accession: GSM249924///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249924/GSM249924.CEL.gz///data_row_count: 54621///ID: X34085///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 74///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: NA///TimeToDeathorLastFollow.Up.Months.: NA///ResidualDisease: >1///ArrayedSite: PE
1
title: X34086///geo_accession: GSM249923///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249923/GSM249923.CEL.gz///data_row_count: 54621///ID: X34086///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 74///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 3///TimeToDeathorLastFollow.Up.Months.: 3///ResidualDisease: >1///ArrayedSite: PE
1
title: X34090///geo_accession: GSM249922///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : IB///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249922/GSM249922.CEL.gz///data_row_count: 54621///ID: X34090///k.meansGroup: 6///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: I///Grade: 3///PatientAge.Years.: 57///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 32///TimeToDeathorLastFollow.Up.Months.: 32///ResidualDisease: nil///ArrayedSite: OV
1
title: X34102///geo_accession: GSM249921///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249921/GSM249921.CEL.gz///data_row_count: 54621///ID: X34102///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 70///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 10///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: >1///ArrayedSite: PE
1
title: X34103///geo_accession: GSM249920///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249920/GSM249920.CEL.gz///data_row_count: 54621///ID: X34103///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 33///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 15///TimeToDeathorLastFollow.Up.Months.: 37///ResidualDisease: >1///ArrayedSite: OV
1
title: X34111///geo_accession: GSM249919///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249919/GSM249919.CEL.gz///data_row_count: 54621///ID: X34111///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 60///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 10///TimeToDeathorLastFollow.Up.Months.: 22///ResidualDisease: <1///ArrayedSite: OV
1
title: X34113///geo_accession: GSM249918///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249918/GSM249918.CEL.gz///data_row_count: 54621///ID: X34113///k.meansGroup: 6///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 54///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 30///TimeToDeathorLastFollow.Up.Months.: 30///ResidualDisease: nil///ArrayedSite: OV
1
title: X34117///geo_accession: GSM249917///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249917/GSM249917.CEL.gz///data_row_count: 54621///ID: X34117///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 60///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 12///TimeToDeathorLastFollow.Up.Months.: 36///ResidualDisease: NK///ArrayedSite: PE
1
title: X34125///geo_accession: GSM249916///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249916/GSM249916.CEL.gz///data_row_count: 54621///ID: X34125///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 44///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 30///TimeToDeathorLastFollow.Up.Months.: 30///ResidualDisease: <1///ArrayedSite: OV
1
title: X34165///geo_accession: GSM249915///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249915/GSM249915.CEL.gz///data_row_count: 54621///ID: X34165///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 43///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 13///TimeToDeathorLastFollow.Up.Months.: 30///ResidualDisease: <1///ArrayedSite: PE
1
title: X34168///geo_accession: GSM249914///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249914/GSM249914.CEL.gz///data_row_count: 54621///ID: X34168///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 63///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 5///TimeToDeathorLastFollow.Up.Months.: 13///ResidualDisease: >1///ArrayedSite: PE
1
title: X34172///geo_accession: GSM249913///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249913/GSM249913.CEL.gz///data_row_count: 54621///ID: X34172///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 71///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 14///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: >1///ArrayedSite: OV
1
title: X34186///geo_accession: GSM249912///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249912/GSM249912.CEL.gz///data_row_count: 54621///ID: X34186///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 55///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 21///TimeToDeathorLastFollow.Up.Months.: 21///ResidualDisease: <1///ArrayedSite: PE
1
title: X34202///geo_accession: GSM249911///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249911/GSM249911.CEL.gz///data_row_count: 54621///ID: X34202///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 62///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 20///ResidualDisease: <1///ArrayedSite: OV
1
title: X34207///geo_accession: GSM249910///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 1///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249910/GSM249910.CEL.gz///data_row_count: 54621///ID: X34207///k.meansGroup: 3///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 1///PatientAge.Years.: 52///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 23///TimeToDeathorLastFollow.Up.Months.: 23///ResidualDisease: nil///ArrayedSite: OV
1
title: X34801///geo_accession: GSM249909///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249909/GSM249909.CEL.gz///data_row_count: 54621///ID: X34801///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 60///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: NA///TimeToDeathorLastFollow.Up.Months.: NA///ResidualDisease: >1///ArrayedSite: PE
1
(Other)
186
Value
An expression set
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Description Format Details Value
Description
The study aim to identify novel molecular subtypes of ovarian cancer by gene expression profiling with linkage to clinical and pathologic features.Microarray gene expression profiling was done on 285 serous and endometrioid tumors of the ovary, peritoneum, and fallopian tube. K-means clustering was applied to identify robust molecular subtypes. Statistical analysis identified differentially expressed genes, pathways, and gene ontologies. Laser capture microdissection, pathology review, and immunohistochemistry validated the array-based findings. Patient survival within k-means groups was evaluated using Cox proportional hazards models. Class prediction validated k-means groups in an independent dataset. A semisupervised survival analysis of the array data was used to compare against unsupervised clustering results.Optimal clustering of array data identified six molecular subtypes. Two subtypes represented predominantly serous low malignant potential and low-grade endometrioid subtypes, respectively. The remaining four subtypes represented higher grade and advanced stage cancers of serous and endometrioid morphology. A novel subtype of high-grade serous cancers reflected a mesenchymal cell type, characterized by overexpression of N-cadherin and P-cadherin and low expression of differentiation markers, including CA125 and MUC1. A poor prognosis subtype was defined by a reactive stroma gene expression signature, correlating with extensive desmoplasia in such samples. A similar poor prognosis signature could be found using a semisupervised analysis. Each subtype displayed distinct levels and patterns of immune cell infiltration. Class prediction identified similar subtypes in an independent ovarian dataset with similar prognostic trends.Gene expression profiling identified molecular subtypes of ovarian cancer of biological and clinical importance.
Format
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 | experimentData(eset):
Experiment data
Experimenter name: Tothill RW, Tinker AV, George J, Brown R, Fox SB, Lade S, Johnson DS, Trivett MK, Etemadmoghadam D, Locandro B, Traficante N, Fereday S, Hung JA, Chiew YE, Haviv I, Gertig D, DeFazio A, Bowtell DD.Novel molecular subtypes of serous and endometrioid ovarian cancer linked to clinical outcome. Clin Cancer Res. 2008 Aug 15; 14(16):5198-208.
Laboratory: Tothill, Bowtell 2008
Contact information:
Title: Novel molecular subtypes of serous and endometrioid ovarian cancer linked to clinical outcome.
URL:
PMIDs: 18698038
Abstract: A 243 word abstract is available. Use 'abstract' method.
Information is available on: preprocessing
notes:
platform_title:
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
platform_shorttitle:
Affymetrix HG-U133Plus2
platform_summary:
hgu133plus2
platform_manufacturer:
Affymetrix
platform_distribution:
commercial
platform_accession:
GPL570
version:
2015-09-22 20:16:32
featureData(eset):
An object of class 'AnnotatedDataFrame'
featureNames: 1007_s_at 1053_at ... AFFX-HUMISGF3A/M97935_MB_at
(42447 total)
varLabels: probeset gene EntrezGene.ID best_probe
varMetadata: labelDescription
|
Details
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 | assayData: 42447 features, 285 samples
Platform type:
Overall survival time-to-event summary (in years):
Call: survfit(formula = Surv(time, cens) ~ -1)
7 observations deleted due to missingness
n events median 0.95LCL 0.95UCL
278.00 113.00 3.95 3.53 5.01
---------------------------
Available sample meta-data:
---------------------------
alt_sample_name:
X129 X146 X152 X20019 X20025 X20027 X20031 X20032 X20041 X20046
1 1 1 1 1 1 1 1 1 1
X20074 X22002 X22012 X22013 X22020 X22023 X22027 X22029 X22031 X22037
1 1 1 1 1 1 1 1 1 1
X22046 X22047 X22048 X22057 X22058 X2219 X2227 X23026 X23030 X23036
1 1 1 1 1 1 1 1 1 1
X23043 X23052 X23053 X23055 X23066 X23070 X23074 X23077 X23084 X23098
1 1 1 1 1 1 1 1 1 1
X23102 X23106 X23116 X23128 X23139 X23143 X23162 X23165 X23167 X23170
1 1 1 1 1 1 1 1 1 1
X23172 X23177 X23178 X23182 X23187 X23197 X23202 X23204 X23210 X23212
1 1 1 1 1 1 1 1 1 1
X23213 X23221 X26047 X261 X27006 X27098 X32013 X32022 X32032 X32034
1 1 1 1 1 1 1 1 1 1
X32048 X32049 X32054 X32055 X32089 X32098 X32103 X32117 X34019 X34049
1 1 1 1 1 1 1 1 1 1
X34066 X34078 X34080 X34085 X34086 X34090 X34102 X34103 X34111 X34113
1 1 1 1 1 1 1 1 1 1
X34117 X34125 X34165 X34168 X34172 X34186 X34202 X34207 X34801 (Other)
1 1 1 1 1 1 1 1 1 186
sample_type:
tumor
285
histological_type:
endo other ser
20 1 264
primarysite:
ft other ov
8 34 243
arrayedsite:
ft other ov
2 83 200
summarygrade:
high low NA's
163 116 6
summarystage:
early late NA's
42 240 3
tumorstage:
1 2 3 4 NA's
24 18 218 22 3
substage:
a b c NA's
26 19 212 28
grade:
1 2 3 NA's
19 97 163 6
age_at_initial_pathologic_diagnosis:
Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
22.00 53.00 59.00 59.62 68.00 80.00 3
pltx:
n y NA's
39 243 3
tax:
n y NA's
87 195 3
neo:
n y NA's
264 18 3
days_to_tumor_recurrence:
Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
0.0 300.0 450.0 618.9 810.0 4980.0 10
recurrence_status:
norecurrence recurrence NA's
94 188 3
days_to_death:
Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
0.0 547.5 855.0 955.1 1252.0 6420.0 7
vital_status:
deceased living NA's
113 169 3
debulking:
optimal suboptimal NA's
160 88 37
batch:
2004-12-03 2004-12-23 2005-01-12 2005-01-17 2005-01-24 2005-01-31 2005-02-21
3 4 7 7 8 10 10
2005-03-17 2005-05-05 2005-05-09 2005-05-25 2005-05-27 2005-05-30 2005-06-02
2 1 1 2 3 3 6
2005-06-06 2005-06-08 2005-06-16 2005-06-17 2005-06-24 2005-07-06 2005-07-15
4 5 3 5 6 2 9
2005-07-20 2005-07-29 2005-08-03 2005-08-05 2005-08-18 2005-08-24 2005-08-26
7 5 6 3 4 8 4
2005-09-09 2005-09-14 2005-09-16 2005-09-21 2005-10-05 2005-10-26 2005-10-28
4 6 6 4 5 2 4
2005-11-04 2005-11-09 2005-11-11 2005-11-23 2005-12-15 2005-12-21 2006-01-20
6 3 7 4 7 8 3
2006-01-31 2006-02-08 2006-02-28 2006-04-05 2006-04-06 2006-04-12 2006-04-13
7 3 3 7 3 7 4
2006-04-28 2006-05-03 2006-06-06 2006-06-07 2006-06-22 2006-07-07 2006-07-19
6 9 6 3 9 4 7
uncurated_author_metadata:
title: X129///geo_accession: GSM250001///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM250nnn/GSM250001/GSM250001.CEL.gz///data_row_count: 54621///ID: X129///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 65///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 7///TimeToDeathorLastFollow.Up.Months.: 15///ResidualDisease: >1///ArrayedSite: PE
1
title: X146///geo_accession: GSM250000///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : III///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM250nnn/GSM250000/GSM250000.CEL.gz///data_row_count: 54621///ID: X146///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 56///PatientStatus: PF///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 166///TimeToDeathorLastFollow.Up.Months.: 166///ResidualDisease: >1///ArrayedSite: OV
1
title: X152///geo_accession: GSM249999///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249999/GSM249999.CEL.gz///data_row_count: 54621///ID: X152///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 49///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 18///TimeToDeathorLastFollow.Up.Months.: 81///ResidualDisease: macrosizeNK///ArrayedSite: OV
1
title: X20019///geo_accession: GSM249998///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249998/GSM249998.CEL.gz///data_row_count: 54621///ID: X20019///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 3///PatientAge.Years.: 58///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: NA///TimeToDeathorLastFollow.Up.Months.: NA///ResidualDisease: >1///ArrayedSite: OV
1
title: X20025///geo_accession: GSM249997///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249997/GSM249997.CEL.gz///data_row_count: 54621///ID: X20025///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 80///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 12///TimeToDeathorLastFollow.Up.Months.: 43///ResidualDisease: nil///ArrayedSite: PE
1
title: X20027///geo_accession: GSM249996///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249996/GSM249996.CEL.gz///data_row_count: 54621///ID: X20027///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 71///PatientStatus: D*///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 1///TimeToDeathorLastFollow.Up.Months.: 1///ResidualDisease: <1///ArrayedSite: OV
1
title: X20031///geo_accession: GSM249995///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249995/GSM249995.CEL.gz///data_row_count: 54621///ID: X20031///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: II///Grade: 2///PatientAge.Years.: 56///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 30///TimeToDeathorLastFollow.Up.Months.: 43///ResidualDisease: nil///ArrayedSite: OV
1
title: X20032///geo_accession: GSM249994///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IV///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249994/GSM249994.CEL.gz///data_row_count: 54621///ID: X20032///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: IV///Grade: 2///PatientAge.Years.: 63///PatientStatus: D///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 15///ResidualDisease: <1///ArrayedSite: OV
1
title: X20041///geo_accession: GSM249993///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249993/GSM249993.CEL.gz///data_row_count: 54621///ID: X20041///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 3///PatientAge.Years.: 43///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 37///TimeToDeathorLastFollow.Up.Months.: 37///ResidualDisease: nil///ArrayedSite: OV
1
title: X20046///geo_accession: GSM249992///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIA///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249992/GSM249992.CEL.gz///data_row_count: 54621///ID: X20046///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 65///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 33///TimeToDeathorLastFollow.Up.Months.: 33///ResidualDisease: nil///ArrayedSite: OV
1
title: X20074///geo_accession: GSM249991///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Fallopian///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIB///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249991/GSM249991.CEL.gz///data_row_count: 54621///ID: X20074///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: FT///FIGOStage: III///Grade: 3///PatientAge.Years.: 58///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 27///TimeToDeathorLastFollow.Up.Months.: 31///ResidualDisease: nil///ArrayedSite: CO
1
title: X22002///geo_accession: GSM249728///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIB///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249728/GSM249728.CEL.gz///data_row_count: 54621///ID: X22002///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 72///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 36///TimeToDeathorLastFollow.Up.Months.: 36///ResidualDisease: nil///ArrayedSite: OV
1
title: X22012///geo_accession: GSM249990///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249990/GSM249990.CEL.gz///data_row_count: 54621///ID: X22012///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 50///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 27///TimeToDeathorLastFollow.Up.Months.: 43///ResidualDisease: >1///ArrayedSite: OV
1
title: X22013///geo_accession: GSM249989///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIA///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249989/GSM249989.CEL.gz///data_row_count: 54621///ID: X22013///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 2///PatientAge.Years.: 55///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 47///TimeToDeathorLastFollow.Up.Months.: 47///ResidualDisease: <1///ArrayedSite: CO
1
title: X22020///geo_accession: GSM249988///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249988/GSM249988.CEL.gz///data_row_count: 54621///ID: X22020///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 41///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 9///TimeToDeathorLastFollow.Up.Months.: 12///ResidualDisease: >1///ArrayedSite: OV
1
title: X22023///geo_accession: GSM249987///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249987/GSM249987.CEL.gz///data_row_count: 54621///ID: X22023///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 46///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 41///TimeToDeathorLastFollow.Up.Months.: 41///ResidualDisease: >1///ArrayedSite: OV
1
title: X22027///geo_accession: GSM249725///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIA///characteristics_ch1.4: Consolidated.Grade : 1///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249725/GSM249725.CEL.gz///data_row_count: 54621///ID: X22027///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 1///PatientAge.Years.: 47///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 44///TimeToDeathorLastFollow.Up.Months.: 44///ResidualDisease: nil///ArrayedSite: OV
1
title: X22029///geo_accession: GSM249986///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IV///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249986/GSM249986.CEL.gz///data_row_count: 54621///ID: X22029///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: IV///Grade: 3///PatientAge.Years.: 58///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 18///TimeToDeathorLastFollow.Up.Months.: 19///ResidualDisease: >1///ArrayedSite: OV
1
title: X22031///geo_accession: GSM249985///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249985/GSM249985.CEL.gz///data_row_count: 54621///ID: X22031///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 58///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 42///TimeToDeathorLastFollow.Up.Months.: 42///ResidualDisease: <1///ArrayedSite: OV
1
title: X22037///geo_accession: GSM249984///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249984/GSM249984.CEL.gz///data_row_count: 54621///ID: X22037///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 78///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 8///TimeToDeathorLastFollow.Up.Months.: 17///ResidualDisease: >1///ArrayedSite: PE
1
title: X22046///geo_accession: GSM249983///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249983/GSM249983.CEL.gz///data_row_count: 54621///ID: X22046///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 71///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 10///TimeToDeathorLastFollow.Up.Months.: 14///ResidualDisease: >1///ArrayedSite: OV
1
title: X22047///geo_accession: GSM249982///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249982/GSM249982.CEL.gz///data_row_count: 54621///ID: X22047///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 45///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 9///TimeToDeathorLastFollow.Up.Months.: 22///ResidualDisease: >1///ArrayedSite: OV
1
title: X22048///geo_accession: GSM249981///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249981/GSM249981.CEL.gz///data_row_count: 54621///ID: X22048///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 2///PatientAge.Years.: 70///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 35///TimeToDeathorLastFollow.Up.Months.: 35///ResidualDisease: nil///ArrayedSite: OV
1
title: X22057///geo_accession: GSM249980///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249980/GSM249980.CEL.gz///data_row_count: 54621///ID: X22057///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 60///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 23///TimeToDeathorLastFollow.Up.Months.: 23///ResidualDisease: nil///ArrayedSite: PE
1
title: X22058///geo_accession: GSM249979///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IV///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249979/GSM249979.CEL.gz///data_row_count: 54621///ID: X22058///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: IV///Grade: 3///PatientAge.Years.: 45///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 7///TimeToDeathorLastFollow.Up.Months.: 9///ResidualDisease: <1///ArrayedSite: PE
1
title: X2219///geo_accession: GSM249978///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : NA///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249978/GSM249978.CEL.gz///data_row_count: 54621///ID: X2219///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: 3///Grade: NA///PatientAge.Years.: NA///PatientStatus: ///Pltx: ///Tax: ///Neo: ///TimeToRelapseorLastFollow.Up.Months.: NA///TimeToDeathorLastFollow.Up.Months.: NA///ResidualDisease: NK///ArrayedSite: Other
1
title: X2227///geo_accession: GSM249977///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : NA///characteristics_ch1.4: Consolidated.Grade : NA///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249977/GSM249977.CEL.gz///data_row_count: 54621///ID: X2227///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: ///Grade: NA///PatientAge.Years.: NA///PatientStatus: ///Pltx: ///Tax: ///Neo: ///TimeToRelapseorLastFollow.Up.Months.: NA///TimeToDeathorLastFollow.Up.Months.: NA///ResidualDisease: NK///ArrayedSite: Other
1
title: X23026///geo_accession: GSM249976///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249976/GSM249976.CEL.gz///data_row_count: 54621///ID: X23026///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 57///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 13///TimeToDeathorLastFollow.Up.Months.: 36///ResidualDisease: NK///ArrayedSite: OV
1
title: X23030///geo_accession: GSM249975///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249975/GSM249975.CEL.gz///data_row_count: 54621///ID: X23030///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 67///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 19///TimeToDeathorLastFollow.Up.Months.: 44///ResidualDisease: <1///ArrayedSite: OV
1
title: X23036///geo_accession: GSM249727///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249727/GSM249727.CEL.gz///data_row_count: 54621///ID: X23036///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 40///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 39///TimeToDeathorLastFollow.Up.Months.: 39///ResidualDisease: nil///ArrayedSite: OV
1
title: X23043///geo_accession: GSM249974///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249974/GSM249974.CEL.gz///data_row_count: 54621///ID: X23043///k.meansGroup: 6///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: II///Grade: 2///PatientAge.Years.: 43///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 43///TimeToDeathorLastFollow.Up.Months.: 43///ResidualDisease: nil///ArrayedSite: OV
1
title: X23052///geo_accession: GSM249721///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IA///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249721/GSM249721.CEL.gz///data_row_count: 54621///ID: X23052///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: I///Grade: 3///PatientAge.Years.: 46///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 22///TimeToDeathorLastFollow.Up.Months.: 22///ResidualDisease: nil///ArrayedSite: OV
1
title: X23053///geo_accession: GSM249973///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249973/GSM249973.CEL.gz///data_row_count: 54621///ID: X23053///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 73///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 21///TimeToDeathorLastFollow.Up.Months.: 41///ResidualDisease: >1///ArrayedSite: OV
1
title: X23055///geo_accession: GSM249972///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249972/GSM249972.CEL.gz///data_row_count: 54621///ID: X23055///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 57///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 15///TimeToDeathorLastFollow.Up.Months.: 31///ResidualDisease: <1///ArrayedSite: OV
1
title: X23066///geo_accession: GSM249716///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIA///characteristics_ch1.4: Consolidated.Grade : 1///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249716/GSM249716.CEL.gz///data_row_count: 54621///ID: X23066///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 1///PatientAge.Years.: 64///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 18///TimeToDeathorLastFollow.Up.Months.: 18///ResidualDisease: nil///ArrayedSite: OV
1
title: X23070///geo_accession: GSM249971///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IV///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249971/GSM249971.CEL.gz///data_row_count: 54621///ID: X23070///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: IV///Grade: 2///PatientAge.Years.: 48///PatientStatus: D///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 10///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: <1///ArrayedSite: OV
1
title: X23074///geo_accession: GSM249970///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Fallopian///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249970/GSM249970.CEL.gz///data_row_count: 54621///ID: X23074///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: FT///FIGOStage: I///Grade: 3///PatientAge.Years.: 77///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 20///TimeToDeathorLastFollow.Up.Months.: 20///ResidualDisease: nil///ArrayedSite: FT
1
title: X23077///geo_accession: GSM249969///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249969/GSM249969.CEL.gz///data_row_count: 54621///ID: X23077///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 58///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 7///TimeToDeathorLastFollow.Up.Months.: 35///ResidualDisease: >1///ArrayedSite: OV
1
title: X23084///geo_accession: GSM249968///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIB///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249968/GSM249968.CEL.gz///data_row_count: 54621///ID: X23084///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 59///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 22///TimeToDeathorLastFollow.Up.Months.: 28///ResidualDisease: <1///ArrayedSite: OV
1
title: X23098///geo_accession: GSM249967///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249967/GSM249967.CEL.gz///data_row_count: 54621///ID: X23098///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 2///PatientAge.Years.: 77///PatientStatus: PF///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 34///TimeToDeathorLastFollow.Up.Months.: 34///ResidualDisease: nil///ArrayedSite: OV
1
title: X23102///geo_accession: GSM249966///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : IIIB///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249966/GSM249966.CEL.gz///data_row_count: 54621///ID: X23102///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 49///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 33///TimeToDeathorLastFollow.Up.Months.: 33///ResidualDisease: nil///ArrayedSite: OV
1
title: X23106///geo_accession: GSM249965///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249965/GSM249965.CEL.gz///data_row_count: 54621///ID: X23106///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 78///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 11///ResidualDisease: macrosizeNK///ArrayedSite: OV
1
title: X23116///geo_accession: GSM249964///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249964/GSM249964.CEL.gz///data_row_count: 54621///ID: X23116///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 68///PatientStatus: D///Pltx: N///Tax: N///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 4///TimeToDeathorLastFollow.Up.Months.: 8///ResidualDisease: NK///ArrayedSite: PE
1
title: X23128///geo_accession: GSM249963///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249963/GSM249963.CEL.gz///data_row_count: 54621///ID: X23128///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 65///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 13///TimeToDeathorLastFollow.Up.Months.: 34///ResidualDisease: <1///ArrayedSite: PE
1
title: X23139///geo_accession: GSM249962///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249962/GSM249962.CEL.gz///data_row_count: 54621///ID: X23139///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 62///PatientStatus: R///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 9///TimeToDeathorLastFollow.Up.Months.: 31///ResidualDisease: nil///ArrayedSite: OV
1
title: X23143///geo_accession: GSM249961///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIB///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249961/GSM249961.CEL.gz///data_row_count: 54621///ID: X23143///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 57///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 24///TimeToDeathorLastFollow.Up.Months.: 29///ResidualDisease: <1///ArrayedSite: OV
1
title: X23162///geo_accession: GSM249960///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249960/GSM249960.CEL.gz///data_row_count: 54621///ID: X23162///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 46///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 24///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: nil///ArrayedSite: OV
1
title: X23165///geo_accession: GSM249959///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249959/GSM249959.CEL.gz///data_row_count: 54621///ID: X23165///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 62///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 17///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: <1///ArrayedSite: OV
1
title: X23167///geo_accession: GSM249958///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249958/GSM249958.CEL.gz///data_row_count: 54621///ID: X23167///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 59///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 12///TimeToDeathorLastFollow.Up.Months.: 21///ResidualDisease: <1///ArrayedSite: OV
1
title: X23170///geo_accession: GSM249957///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249957/GSM249957.CEL.gz///data_row_count: 54621///ID: X23170///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 49///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 12///TimeToDeathorLastFollow.Up.Months.: 12///ResidualDisease: <1///ArrayedSite: OV
1
title: X23172///geo_accession: GSM249956///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249956/GSM249956.CEL.gz///data_row_count: 54621///ID: X23172///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 59///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 8///TimeToDeathorLastFollow.Up.Months.: 16///ResidualDisease: >1///ArrayedSite: OV
1
title: X23177///geo_accession: GSM249720///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249720/GSM249720.CEL.gz///data_row_count: 54621///ID: X23177///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: I///Grade: 3///PatientAge.Years.: 52///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 23///TimeToDeathorLastFollow.Up.Months.: 23///ResidualDisease: nil///ArrayedSite: OV
1
title: X23178///geo_accession: GSM249955///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249955/GSM249955.CEL.gz///data_row_count: 54621///ID: X23178///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 49///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 13///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: <1///ArrayedSite: OV
1
title: X23182///geo_accession: GSM249954///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249954/GSM249954.CEL.gz///data_row_count: 54621///ID: X23182///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 2///PatientAge.Years.: 73///PatientStatus: PF///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 18///TimeToDeathorLastFollow.Up.Months.: 18///ResidualDisease: nil///ArrayedSite: OV
1
title: X23187///geo_accession: GSM249953///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249953/GSM249953.CEL.gz///data_row_count: 54621///ID: X23187///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 76///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 23///TimeToDeathorLastFollow.Up.Months.: 23///ResidualDisease: <1///ArrayedSite: OV
1
title: X23197///geo_accession: GSM249951///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249951/GSM249951.CEL.gz///data_row_count: 54621///ID: X23197///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 66///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 8///TimeToDeathorLastFollow.Up.Months.: 8///ResidualDisease: >1///ArrayedSite: OV
1
title: X23202///geo_accession: GSM249950///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249950/GSM249950.CEL.gz///data_row_count: 54621///ID: X23202///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 58///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 19///TimeToDeathorLastFollow.Up.Months.: 19///ResidualDisease: <1///ArrayedSite: OV
1
title: X23204///geo_accession: GSM249949///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Fallopian///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IA///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249949/GSM249949.CEL.gz///data_row_count: 54621///ID: X23204///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: FT///FIGOStage: I///Grade: 3///PatientAge.Years.: 67///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 10///TimeToDeathorLastFollow.Up.Months.: 10///ResidualDisease: nil///ArrayedSite: OV
1
title: X23210///geo_accession: GSM249948///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Adeno///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249948/GSM249948.CEL.gz///data_row_count: 54621///ID: X23210///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Adeno///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 62///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 18///TimeToDeathorLastFollow.Up.Months.: 20///ResidualDisease: <1///ArrayedSite: OV
1
title: X23212///geo_accession: GSM249947///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249947/GSM249947.CEL.gz///data_row_count: 54621///ID: X23212///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 2///PatientAge.Years.: 75///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 3///TimeToDeathorLastFollow.Up.Months.: 3///ResidualDisease: <1///ArrayedSite: PE
1
title: X23213///geo_accession: GSM249946///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 1///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249946/GSM249946.CEL.gz///data_row_count: 54621///ID: X23213///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 1///PatientAge.Years.: 58///PatientStatus: D///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 2///TimeToDeathorLastFollow.Up.Months.: 11///ResidualDisease: >1///ArrayedSite: PE
1
title: X23221///geo_accession: GSM249945///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249945/GSM249945.CEL.gz///data_row_count: 54621///ID: X23221///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 67///PatientStatus: R///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 4///TimeToDeathorLastFollow.Up.Months.: 18///ResidualDisease: <1///ArrayedSite: PE
1
title: X26047///geo_accession: GSM249944///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249944/GSM249944.CEL.gz///data_row_count: 54621///ID: X26047///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 2///PatientAge.Years.: 72///PatientStatus: R///Pltx: N///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 6///TimeToDeathorLastFollow.Up.Months.: 31///ResidualDisease: >1///ArrayedSite: PE
1
title: X261///geo_accession: GSM249943///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IV///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249943/GSM249943.CEL.gz///data_row_count: 54621///ID: X261///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: IV///Grade: 2///PatientAge.Years.: 55///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 6///TimeToDeathorLastFollow.Up.Months.: 13///ResidualDisease: >1///ArrayedSite: OV
1
title: X27006///geo_accession: GSM249942///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249942/GSM249942.CEL.gz///data_row_count: 54621///ID: X27006///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 73///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 23///ResidualDisease: <1///ArrayedSite: OV
1
title: X27098///geo_accession: GSM249941///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249941/GSM249941.CEL.gz///data_row_count: 54621///ID: X27098///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 61///PatientStatus: R///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 23///TimeToDeathorLastFollow.Up.Months.: 23///ResidualDisease: nil///ArrayedSite: OV
1
title: X32013///geo_accession: GSM249940///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249940/GSM249940.CEL.gz///data_row_count: 54621///ID: X32013///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 68///PatientStatus: D///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 2///TimeToDeathorLastFollow.Up.Months.: 2///ResidualDisease: NK///ArrayedSite: OV
1
title: X32022///geo_accession: GSM249939///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249939/GSM249939.CEL.gz///data_row_count: 54621///ID: X32022///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 68///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 32///TimeToDeathorLastFollow.Up.Months.: 37///ResidualDisease: >1///ArrayedSite: OV
1
title: X32032///geo_accession: GSM249938///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Fallopian///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249938/GSM249938.CEL.gz///data_row_count: 54621///ID: X32032///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: FT///FIGOStage: II///Grade: 3///PatientAge.Years.: 60///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 35///TimeToDeathorLastFollow.Up.Months.: 35///ResidualDisease: nil///ArrayedSite: FT
1
title: X32034///geo_accession: GSM249937///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249937/GSM249937.CEL.gz///data_row_count: 54621///ID: X32034///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 58///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 11///ResidualDisease: >1///ArrayedSite: OV
1
title: X32048///geo_accession: GSM249936///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIA///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249936/GSM249936.CEL.gz///data_row_count: 54621///ID: X32048///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 69///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 41///TimeToDeathorLastFollow.Up.Months.: 41///ResidualDisease: nil///ArrayedSite: OV
1
title: X32049///geo_accession: GSM249935///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Fallopian///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249935/GSM249935.CEL.gz///data_row_count: 54621///ID: X32049///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: FT///FIGOStage: III///Grade: 3///PatientAge.Years.: 57///PatientStatus: R///Pltx: Y///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 29///ResidualDisease: >1///ArrayedSite: PE
1
title: X32054///geo_accession: GSM249934///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249934/GSM249934.CEL.gz///data_row_count: 54621///ID: X32054///k.meansGroup: 3///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 45///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 36///ResidualDisease: >1///ArrayedSite: OV
1
title: X32055///geo_accession: GSM249933///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IV///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249933/GSM249933.CEL.gz///data_row_count: 54621///ID: X32055///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: IV///Grade: 2///PatientAge.Years.: 59///PatientStatus: D///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 8///TimeToDeathorLastFollow.Up.Months.: 16///ResidualDisease: NK///ArrayedSite: OV
1
title: X32089///geo_accession: GSM249932///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249932/GSM249932.CEL.gz///data_row_count: 54621///ID: X32089///k.meansGroup: 3///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 49///PatientStatus: R///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 21///TimeToDeathorLastFollow.Up.Months.: 22///ResidualDisease: macrosizeNK///ArrayedSite: OV
1
title: X32098///geo_accession: GSM249931///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249931/GSM249931.CEL.gz///data_row_count: 54621///ID: X32098///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 2///PatientAge.Years.: 77///PatientStatus: D///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 1///TimeToDeathorLastFollow.Up.Months.: 1///ResidualDisease: >1///ArrayedSite: PE
1
title: X32103///geo_accession: GSM249930///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIA///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249930/GSM249930.CEL.gz///data_row_count: 54621///ID: X32103///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 75///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 19///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: nil///ArrayedSite: OV
1
title: X32117///geo_accession: GSM249715///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : LMP///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIA///characteristics_ch1.4: Consolidated.Grade : 1///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249715/GSM249715.CEL.gz///data_row_count: 54621///ID: X32117///k.meansGroup: 3///Type: LMP///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: II///Grade: 1///PatientAge.Years.: 26///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 8///TimeToDeathorLastFollow.Up.Months.: 8///ResidualDisease: nil///ArrayedSite: OV
1
title: X34019///geo_accession: GSM249929///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249929/GSM249929.CEL.gz///data_row_count: 54621///ID: X34019///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 57///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 22///ResidualDisease: <1///ArrayedSite: OV
1
title: X34049///geo_accession: GSM249928///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IA///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249928/GSM249928.CEL.gz///data_row_count: 54621///ID: X34049///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: I///Grade: 3///PatientAge.Years.: 56///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 40///TimeToDeathorLastFollow.Up.Months.: 40///ResidualDisease: nil///ArrayedSite: OV
1
title: X34066///geo_accession: GSM249927///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249927/GSM249927.CEL.gz///data_row_count: 54621///ID: X34066///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 47///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 14///TimeToDeathorLastFollow.Up.Months.: 26///ResidualDisease: nil///ArrayedSite: OV
1
title: X34078///geo_accession: GSM249926///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249926/GSM249926.CEL.gz///data_row_count: 54621///ID: X34078///k.meansGroup: 2///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 53///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: Y///TimeToRelapseorLastFollow.Up.Months.: 32///TimeToDeathorLastFollow.Up.Months.: 32///ResidualDisease: <1///ArrayedSite: OV
1
title: X34080///geo_accession: GSM249925///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249925/GSM249925.CEL.gz///data_row_count: 54621///ID: X34080///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 60///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 10///TimeToDeathorLastFollow.Up.Months.: 14///ResidualDisease: <1///ArrayedSite: PE
1
title: X34085///geo_accession: GSM249924///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249924/GSM249924.CEL.gz///data_row_count: 54621///ID: X34085///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 74///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: NA///TimeToDeathorLastFollow.Up.Months.: NA///ResidualDisease: >1///ArrayedSite: PE
1
title: X34086///geo_accession: GSM249923///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249923/GSM249923.CEL.gz///data_row_count: 54621///ID: X34086///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 74///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 3///TimeToDeathorLastFollow.Up.Months.: 3///ResidualDisease: >1///ArrayedSite: PE
1
title: X34090///geo_accession: GSM249922///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Endo///characteristics_ch1.3: StageCode : IB///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249922/GSM249922.CEL.gz///data_row_count: 54621///ID: X34090///k.meansGroup: 6///Type: MAL///HistologicalSubtype: Endo///PrimarySite: OV///FIGOStage: I///Grade: 3///PatientAge.Years.: 57///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 32///TimeToDeathorLastFollow.Up.Months.: 32///ResidualDisease: nil///ArrayedSite: OV
1
title: X34102///geo_accession: GSM249921///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249921/GSM249921.CEL.gz///data_row_count: 54621///ID: X34102///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 70///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 10///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: >1///ArrayedSite: PE
1
title: X34103///geo_accession: GSM249920///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249920/GSM249920.CEL.gz///data_row_count: 54621///ID: X34103///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 33///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 15///TimeToDeathorLastFollow.Up.Months.: 37///ResidualDisease: >1///ArrayedSite: OV
1
title: X34111///geo_accession: GSM249919///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249919/GSM249919.CEL.gz///data_row_count: 54621///ID: X34111///k.meansGroup: NC///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 60///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 10///TimeToDeathorLastFollow.Up.Months.: 22///ResidualDisease: <1///ArrayedSite: OV
1
title: X34113///geo_accession: GSM249918///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249918/GSM249918.CEL.gz///data_row_count: 54621///ID: X34113///k.meansGroup: 6///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 54///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 30///TimeToDeathorLastFollow.Up.Months.: 30///ResidualDisease: nil///ArrayedSite: OV
1
title: X34117///geo_accession: GSM249917///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249917/GSM249917.CEL.gz///data_row_count: 54621///ID: X34117///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 60///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 12///TimeToDeathorLastFollow.Up.Months.: 36///ResidualDisease: NK///ArrayedSite: PE
1
title: X34125///geo_accession: GSM249916///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249916/GSM249916.CEL.gz///data_row_count: 54621///ID: X34125///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 44///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 30///TimeToDeathorLastFollow.Up.Months.: 30///ResidualDisease: <1///ArrayedSite: OV
1
title: X34165///geo_accession: GSM249915///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249915/GSM249915.CEL.gz///data_row_count: 54621///ID: X34165///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 43///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 13///TimeToDeathorLastFollow.Up.Months.: 30///ResidualDisease: <1///ArrayedSite: PE
1
title: X34168///geo_accession: GSM249914///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249914/GSM249914.CEL.gz///data_row_count: 54621///ID: X34168///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 63///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 5///TimeToDeathorLastFollow.Up.Months.: 13///ResidualDisease: >1///ArrayedSite: PE
1
title: X34172///geo_accession: GSM249913///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249913/GSM249913.CEL.gz///data_row_count: 54621///ID: X34172///k.meansGroup: 5///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 71///PatientStatus: R///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 14///TimeToDeathorLastFollow.Up.Months.: 24///ResidualDisease: >1///ArrayedSite: OV
1
title: X34186///geo_accession: GSM249912///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 2///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249912/GSM249912.CEL.gz///data_row_count: 54621///ID: X34186///k.meansGroup: 4///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 2///PatientAge.Years.: 55///PatientStatus: PF///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 21///TimeToDeathorLastFollow.Up.Months.: 21///ResidualDisease: <1///ArrayedSite: PE
1
title: X34202///geo_accession: GSM249911///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Peritoneum///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249911/GSM249911.CEL.gz///data_row_count: 54621///ID: X34202///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: PE///FIGOStage: III///Grade: 3///PatientAge.Years.: 62///PatientStatus: D///Pltx: Y///Tax: Y///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 11///TimeToDeathorLastFollow.Up.Months.: 20///ResidualDisease: <1///ArrayedSite: OV
1
title: X34207///geo_accession: GSM249910///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 1///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249910/GSM249910.CEL.gz///data_row_count: 54621///ID: X34207///k.meansGroup: 3///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 1///PatientAge.Years.: 52///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: 23///TimeToDeathorLastFollow.Up.Months.: 23///ResidualDisease: nil///ArrayedSite: OV
1
title: X34801///geo_accession: GSM249909///status: Public on Mar 01 2008///submission_date: Dec 14 2007///last_update_date: Dec 19 2007///type: RNA///channel_count: 1///source_name_ch1: Carcinoma of ovary, fallopian tube or peritonem///organism_ch1: Homo sapiens///characteristics_ch1: Primary.Site : Ovary///characteristics_ch1.1: Type : Malignant///characteristics_ch1.2: Subtype : Ser/PapSer///characteristics_ch1.3: StageCode : IIIC///characteristics_ch1.4: Consolidated.Grade : 3///treatment_protocol_ch1: Frozen tissue stored at -80oC taken after surgery///molecule_ch1: total RNA///extract_protocol_ch1: Trizol extraction and column chromotogrpahy///label_ch1: biotin///label_protocol_ch1: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).///taxid_ch1: 9606///hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.///scan_protocol: GeneChips were scanned using Affymetrix GS300-7G scanner///description: Gene expression data from human ovarian carcinoma///data_processing: The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method///platform_id: GPL570///contact_name: Prof David,,Bowtell PhD.///contact_email: d.bowtell@petermac.org///contact_phone: +613 96561287///contact_fax: +613 96561414///contact_department: Research Division///contact_institute: PeterMacCallum Cancer Centre///contact_address: Locked Bag 1 A' Beckett St///contact_city: Melbourne///contact_state: VIC///contact_zip.postal_code: 8006///contact_country: Australia///contact_web_link: http://www.petermac-research.org.au///supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM249nnn/GSM249909/GSM249909.CEL.gz///data_row_count: 54621///ID: X34801///k.meansGroup: 1///Type: MAL///HistologicalSubtype: Ser///PrimarySite: OV///FIGOStage: III///Grade: 3///PatientAge.Years.: 60///PatientStatus: PF///Pltx: N///Tax: N///Neo: N///TimeToRelapseorLastFollow.Up.Months.: NA///TimeToDeathorLastFollow.Up.Months.: NA///ResidualDisease: >1///ArrayedSite: PE
1
(Other)
186
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Value
An expression set
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