scGOBarPlot: scGOBarPlot visualization

Description Usage Arguments Author(s)

View source: R/scGOBarPlot.R

Description

GO BarPlot visualization for each cluster

Usage

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scGOBarPlot(
  object = NULL,
  key = NULL,
  cluster = NULL,
  direction = "up",
  ont = "BP",
  top_n = 20,
  extra = NULL
)

Arguments

object

Seurat object

key

The 'scGO' results that stored in object@misc$key

cluster

Cluster to presentation

direction

Regulation direction to use, only 'up' or 'down'

ont

Ontology to use, only 'BP', 'CC', or 'MF'

top_n

Only top_n entries to plot

extra

Extra slot used to fetch GOs

Author(s)

rstatistics


ncrna/SCKIT documentation built on Jan. 2, 2022, 10:59 a.m.