scPopulationPlot: scPopulationPlot

In ncrna/SCKIT: Yet Another Single-Cell Analysis Toolkit (Yeskit)

Description

Population plot by clusters or samples

Usage

scPopulationPlot(
  object = NULL,
  by = c("sample", "cluster"),
  order = NULL,
  cols = NULL
)

Arguments

object	Seurat object
by	String used to separate cluster/sample, only 'cluster' or 'sample' is accepted
order	A vector to set the order of samples
cols	Vector of colors, each color corresponds to an identity class. Use ggplot2's default colors by default. We include a pallete called 'sc' which consists of 36 colors

Value

A dataframe that used to draw this plot

Author(s)

rstatistics

ncrna/SCKIT documentation built on Jan. 2, 2022, 10:59 a.m.