scPathogenDGE: Find differentially expressed genes by species for each...

Description Usage Arguments Value Author(s)

View source: R/scPathogenDGE.R

Description

Find differentially expressed genes by species for each clusters in a dataset

Usage

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scPathogenDGE(
  object = NULL,
  species.by = NULL,
  clusters = NULL,
  min.cells = 20
)

Arguments

object

Seurat object

species.by

A vector of features which is used to divid cells into two groups

clusters

Clusters selected to do DGE

min.cells

Minimum number of cells to do DGE

Value

DGE table

Author(s)

Wei Zhang


ncrna/SCKIT documentation built on Jan. 2, 2022, 10:59 a.m.