read_peaks: Read peaks
In neurogenomics/EpiCompare: Comparison, Benchmarking & QC of Epigenomic Datasets
read_peaks R Documentation
Read peaks
Description
Read peak files.
Usage
read_peaks(path, type, verbose = TRUE)
Arguments
path
Path to peak file.
type
File type to search for. Options include:
"<pattern>"Finds files matching an arbitrary regex pattern
specified by user.
"peaks.stringent"Finds files ending in "*.stringent.bed$"
"peaks.consensus"Finds files ending in "*.consensus.peaks.bed$"
"peaks.consensus.filtered"
Finds files ending in"*.consensus.peaks.filtered.awk.bed$"
"picard"Finds files ending in
"*.target.markdup.MarkDuplicates.metrics.txt$"
verbose
Print messages.
Value
GRanges
neurogenomics/EpiCompare documentation built on April 30, 2024, 3:58 p.m.
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| read_peaks | R Documentation |
Read peaks
Description
Read peak files.
Usage
read_peaks(path, type, verbose = TRUE)
Arguments
path |
Path to peak file. |
type |
File type to search for. Options include:
|
verbose |
Print messages. |
Value
GRanges
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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