Description Usage Arguments Value
when order is specified, use this order; otherwise, try to use clustering; if no clustering is explicitely specified, do not do any ordering
1 | decideOrder(ord, mat, distance, method, direction = "row")
|
ord |
order vector |
mat |
a matrix |
distance |
clustering distance |
direction |
when specified as row, do clustering on rows and calculate row ordering; when specified as column, do the same thing but with trnasformed mat |
a permutation
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