plotTimeSeriesClusters: Plot (time) series over clusters.
In nlhuong/TimeSeriesExperiment: Analysis for short time-series data

Plots timecourse (aggregated over replicates) feature data faceted by computed clusters and experimental group.

plotTimeSeriesClusters(
  object,
  features = NULL,
  transparency = 0.5,
  ncol = 4,
  scales = "free"
)

`object`	A `TimeSeriesExperiment` object.
`features`	A vector of names of selected features to plot.
`transparency`	transparency of trajectory lines.
`ncol`	number of columns in the factet plot.
`scales`	character scalar indecating facet scales, by default "free".

ggplot object

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data("endoderm_small")
endoderm_small <- clusterTimeSeries(endoderm_small)
plotTimeSeriesClusters(endoderm_small)

nlhuong/TimeSeriesExperiment documentation built on Sept. 8, 2021, 12:30 a.m.

nlhuong/TimeSeriesExperiment index

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