Description Usage Arguments Value Examples
PCA plot for data features, with time-series levels overlayed on top.
1 2 3 4 5 6 7 8 9 |
object |
A |
axis |
An integer vector indicating principal components to use for plotting, by default 1:2. |
m |
a number of tiles in a grid in the horizontal direction. |
n |
a number of tiles in a grid in the vertical direction. |
group.highlight |
An optional character string indicating the group subset for which the time-course trends should be plotted. By default all time-course trends are plotted for all groups. |
linecol |
a vector indicating the color of the gene profile trend line, different for each group. |
... |
other parameters for the line plots. |
None
1 2 3 | data("endoderm_small")
endoderm_small <- runPCA(endoderm_small)
plotTimeSeriesPCA(endoderm_small)
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