|Catalog||A function for doing simple network analysis on sets of...|
|CoreAligner||A function for aligning core genomes.|
|EdgeMatrix||A Function for creating a matrix of 'edges' or predicted...|
|GetOrthologSummary||Summarize statistics about ortholog predictions.|
|HSSPScore||A function for determining the HSSP score for a given...|
|NCBIGFFParser||A function for parsing genomic General Format Files directly...|
|NucleotideOverlap||A function for determining nucleotide overlap that links...|
|ParseSubGraphs||A function for parsing subgraphs of a large adjacency graph.|
|ReadMCL||Read an MCL output file into R.|
|ReciprocalBestBlast||A generic reciprocal best blast search.|
|ResolveConflicts||A function for removing conflicting ortholog predictions|
|SubCatalog||A function for doing simple network analysis on sets of...|
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