A Package of Various Tools

Catalog | A function for doing simple network analysis on sets of... |

CoreAligner | A function for aligning core genomes. |

EdgeMatrix | A Function for creating a matrix of 'edges' or predicted... |

GetOrthologSummary | Summarize statistics about ortholog predictions. |

HSSPScore | A function for determining the HSSP score for a given... |

NCBIGFFParser | A function for parsing genomic General Format Files directly... |

NucleotideOverlap | A function for determining nucleotide overlap that links... |

ParseSubGraphs | A function for parsing subgraphs of a large adjacency graph. |

ReadMCL | Read an MCL output file into R. |

ReciprocalBestBlast | A generic reciprocal best blast search. |

ResolveConflicts | A function for removing conflicting ortholog predictions |

SubCatalog | A function for doing simple network analysis on sets of... |

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