getForMigtable: Getting the Forward Migration
In ocbe-uio/CellMigRation: Track Cells, Analyze Cell Trajectories and Compute Migration Statistics
Description
Usage
Arguments
Value
Author(s)
References
Examples
View source: R/all_functions_v8.R
Description
The ForwardMigration function automatically generates
data and plots for forward persistence and speed.
Usage
1
getForMigtable(object)
Arguments
object
CellMig class object, which is a list of
data frames resulted from the PreProcessing.
Value
A data frame inclusing values of the forward migration
analysis.
Author(s)
Salim Ghannoum salim.ghannoum@medisin.uio.no
References
https://www.data-pulse.com/dev_site/cellmigration/
Examples
1
2
3
4
5
6
7
8
data(WSADataset)
wsaDF <- WSADataset[seq(1,300,by=1),]
wsaTD <- CellMig(wsaDF)
wsaTD <- wsaPreProcessing(wsaTD,FrameN=55)
wsaTD <-ForwardMigration(wsaTD, TimeInterval=10, sfptPLOT=FALSE,
afptPLOT= FALSE, sfpPLOT= FALSE,
afpPLOT= FALSE, export=FALSE)
head(getForMigtable(wsaTD))
ocbe-uio/CellMigRation documentation built on Dec. 26, 2021, 10:19 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) References Examples
View source: R/all_functions_v8.R
Description
The ForwardMigration function automatically generates data and plots for forward persistence and speed.
Usage
1 | getForMigtable(object)
|
Arguments
object |
|
Value
A data frame inclusing values of the forward migration analysis.
Author(s)
Salim Ghannoum salim.ghannoum@medisin.uio.no
References
https://www.data-pulse.com/dev_site/cellmigration/
Examples
1 2 3 4 5 6 7 8 | data(WSADataset)
wsaDF <- WSADataset[seq(1,300,by=1),]
wsaTD <- CellMig(wsaDF)
wsaTD <- wsaPreProcessing(wsaTD,FrameN=55)
wsaTD <-ForwardMigration(wsaTD, TimeInterval=10, sfptPLOT=FALSE,
afptPLOT= FALSE, sfpPLOT= FALSE,
afpPLOT= FALSE, export=FALSE)
head(getForMigtable(wsaTD))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.