fixDA: Direction AutoCorrelation

In ocbe-uio/cellmigRation: Track Cells, Analyze Cell Trajectories and Compute Migration Statistics

Description

This function is a part of the DiAutoCor function, which computes the angular persistence across several sequantial time intervals.

Usage

fixDA(Object, Step, sLAG, sPLOT, aPLOT, color, export, ExpName, new.fld)

Arguments

Step	A numeric value of the number of trajectory steps.
sLAG	A numeric value to be used to get the number of lags for the slope fitting. Default is 0.25, which represents 25 percent of the steps.
sPLOT	A logical vector that allows generating individual plots showing the angular persistence across several sequantial time intervals. Default is TRUE.
aPLOT	A logical vector that allows generating a plot showing the angular persistence across several sequantial time intervals of all cells. Default is TRUE.
color	A vector of colors that will be used for the plots
export	if 'TRUE' (default), exports function output
ExpName	String, name of the experiment
new.fld	path to the folder where to save files
object	CellMig class object, which is a list of data frames resulted from the PreProcessing.

Value

A data frame named "DA.ResultsTable".

Author(s)

Salim Ghannoum [e-mail]

References

https://www.data-pulse.com/dev_site/cellmigration/

Examples

cellmigRation:::fixDA(1, 1, 1, 1, 1, 1, 1, 1, 1)

ocbe-uio/cellmigRation documentation built on Dec. 16, 2021, 10:59 p.m.