View source: R/phyloscan.fun.R
phsc.bam.get.length.and.pos.of.mergedreads | R Documentation |
This function calculates the position and length of the two sequenced segments from a single RNA template, potentially after merging when both segments overlap.
phsc.bam.get.length.and.pos.of.mergedreads(bam.file.name, error.strict = TRUE)
bam.file.name |
full path name to bam file. |
data.table with columns QNAME (template query ID), POS (leftmost position of read), LEN (length of read)
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