View source: R/phyloscan.fun.scripting.R
phsc.cmd.bam.calculate.read.distribution | R Documentation |
This function generates bash commands to calculate read distribution in bam file
phsc.cmd.bam.calculate.read.distribution(pty.runs, pty.args)
pty.runs |
data.table with columns SAMPLE_ID and PTY_RUN |
pty.args |
List of input variables containing the fields "prog.bam.distr.calculator", "data.dir", "out.dir", "work.dir" |
character string of bash commands.
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