Description Usage Arguments Value Examples
retrieve internal id, name (GSM), description for sample providing sampleName (GSM)
1 2 3 4 5 | get_sample_by_gsm(
compendium = "vespucci",
normalization = "limma",
sampleName_In = "GSM1313535"
)
|
compendium |
A string - the selected compendium |
normalization |
A string - 'tpm' (as default), 'limma' or 'legacy' |
sampleName_In |
A character5 vector - GSMs (GEO Sample access ids) |
A data.frame with three columns: sampleId, sampleName, sampleDescription
1 2 3 4 | ## Not run:
get_sample_by_gsm(sampleName_In="GSM147672.ch1")
## End(Not run)
|
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