view_plot: Show a plot using the rstudio viewer

In onertipaday/rcompass: R Client for the COMPASS GrapgQL API

Description

Show a plot using the rstudio viewer

Usage

view_plot(
  module = NULL,
  plotType = "biological_features_uncentered_correlation_distribution",
  normalization = "legacy",
  alternativeColoring = TRUE,
  threshold = 0.7,
  min = -6,
  max = 6
)

Arguments

module	A matrix with valid rownames (biofeatureNames) and colnames (samplesetsNames)
plotType	A string - see get_available_plot_methods
normalization	A string - either 'limma','tpm' or legacy as normalization
alternativeColoring	A logical - if TRUE (defautl) a color blind friendly palette is used
threshold	A numeric - A Pearson correalation value
min	A numeric (-6 default)
max	A numeric (6 default)

Value

A plotly htmlwidget

onertipaday/rcompass documentation built on Sept. 18, 2021, 5:13 p.m.