Files in onertipaday/rcompass

R Client for the COMPASS GrapgQL API

.travis.yml

DESCRIPTION

LICENSE.md

NAMESPACE

R/aggregate.R R/modules.R R/plots.R R/queries.R R/rcompass-package.R R/utilities.R R/zzz.R README.Rmd README.md WebApp/app.R

docs/404.html

docs/LICENSE.html

docs/TODO.html

docs/articles/index.html

docs/articles/rcompass.html

docs/articles/rcompass_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/rcompass_files/header-attrs-2.10/header-attrs.js

docs/articles/rcompass_files/header-attrs-2.7/header-attrs.js

docs/articles/rcompass_files/header-attrs-2.8/header-attrs.js

docs/articles/rcompass_files/header-attrs-2.9/header-attrs.js

docs/articles/usecase01.html

docs/articles/usecase01_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/usecase01_files/crosstalk-1.1.0.1/css/crosstalk.css

docs/articles/usecase01_files/crosstalk-1.1.0.1/js/crosstalk.js

docs/articles/usecase01_files/crosstalk-1.1.0.1/js/crosstalk.js.map

docs/articles/usecase01_files/crosstalk-1.1.0.1/js/crosstalk.min.js

docs/articles/usecase01_files/crosstalk-1.1.0.1/js/crosstalk.min.js.map

docs/articles/usecase01_files/datatables-binding-0.14/datatables.js

docs/articles/usecase01_files/datatables-css-0.0.0/datatables-crosstalk.css

docs/articles/usecase01_files/dt-core-1.10.20/css/jquery.dataTables.extra.css

docs/articles/usecase01_files/dt-core-1.10.20/css/jquery.dataTables.min.css

docs/articles/usecase01_files/dt-core-1.10.20/js/jquery.dataTables.min.js

docs/articles/usecase01_files/figure-html/unnamed-chunk-15-1.png

docs/articles/usecase01_files/figure-html/unnamed-chunk-16-1.png

docs/articles/usecase01_files/figure-html/unnamed-chunk-18-1.png

docs/articles/usecase01_files/figure-html/unnamed-chunk-31-1.png

docs/articles/usecase01_files/figure-html/unnamed-chunk-32-1.png

docs/articles/usecase01_files/header-attrs-2.10/header-attrs.js

docs/articles/usecase01_files/header-attrs-2.7/header-attrs.js

docs/articles/usecase01_files/header-attrs-2.8/header-attrs.js

docs/articles/usecase01_files/header-attrs-2.9/header-attrs.js

docs/articles/usecase01_files/htmlwidgets-1.5.1/htmlwidgets.js

docs/articles/usecase01_files/jquery-1.11.3/jquery-AUTHORS.txt

docs/articles/usecase01_files/jquery-1.11.3/jquery.js

docs/articles/usecase01_files/jquery-1.11.3/jquery.min.js

docs/articles/usecase01_files/jquery-1.11.3/jquery.min.map

docs/articles/usecase01_files/jquery-1.12.4/LICENSE.txt

docs/articles/usecase01_files/jquery-1.12.4/jquery.min.js

docs/articles/usecase01_files/plotly-binding-4.9.2.1/plotly.js

docs/articles/usecase01_files/plotly-htmlwidgets-css-1.52.2/plotly-htmlwidgets.css

docs/articles/usecase01_files/plotly-main-1.52.2/plotly-latest.min.js

docs/articles/usecase01_files/typedarray-0.1/typedarray.min.js

docs/articles/usecase02.html

docs/articles/usecase02_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/usecase02_files/crosstalk-1.1.1/css/crosstalk.css

docs/articles/usecase02_files/crosstalk-1.1.1/js/crosstalk.js

docs/articles/usecase02_files/crosstalk-1.1.1/js/crosstalk.js.map

docs/articles/usecase02_files/crosstalk-1.1.1/js/crosstalk.min.js

docs/articles/usecase02_files/crosstalk-1.1.1/js/crosstalk.min.js.map

docs/articles/usecase02_files/figure-html/format_module-1.png

docs/articles/usecase02_files/figure-html/plot_mixtools-1.png

docs/articles/usecase02_files/figure-html/unnamed-chunk-11-1.png

docs/articles/usecase02_files/figure-html/unnamed-chunk-12-1.png

docs/articles/usecase02_files/figure-html/unnamed-chunk-12-2.png

docs/articles/usecase02_files/figure-html/unnamed-chunk-12-3.png

docs/articles/usecase02_files/header-attrs-2.7/header-attrs.js

docs/articles/usecase02_files/htmlwidgets-1.5.3/htmlwidgets.js

docs/articles/usecase02_files/jquery-3.5.1/jquery-AUTHORS.txt

docs/articles/usecase02_files/jquery-3.5.1/jquery.js

docs/articles/usecase02_files/jquery-3.5.1/jquery.min.js

docs/articles/usecase02_files/jquery-3.5.1/jquery.min.map

docs/articles/usecase02_files/plotly-binding-4.9.3/plotly.js

docs/articles/usecase02_files/plotly-htmlwidgets-css-1.57.1/plotly-htmlwidgets.css

docs/articles/usecase02_files/plotly-main-1.57.1/plotly-latest.min.js

docs/articles/usecase02_files/typedarray-0.1/typedarray.min.js

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/images/logo.png

docs/index.html

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/Rplot001.png

docs/reference/build_query.html

docs/reference/create_module.html

docs/reference/create_module_bf.html

docs/reference/create_module_ss.html

docs/reference/describe_module.html

docs/reference/enrich_module.html

docs/reference/get_OntologyNode.html

docs/reference/get_annotation_triples.html

docs/reference/get_available_compendia.html

docs/reference/get_available_normalization.html

docs/reference/get_available_plot_methods.html

docs/reference/get_biofeature_annotation_rdf.html

docs/reference/get_biofeature_annotations.html

docs/reference/get_biofeature_by_ann_term.html

docs/reference/get_biofeature_by_name.html

docs/reference/get_biofeature_id.html

docs/reference/get_biofeature_info.html

docs/reference/get_biofeature_name.html

docs/reference/get_biofeature_ranking.html

docs/reference/get_compass_version.html

docs/reference/get_compendia.html

docs/reference/get_compendium_data_source.html

docs/reference/get_experimentId_by_sampleSetId.html

docs/reference/get_experiments.html

docs/reference/get_ids_from_alias.html

docs/reference/get_ontologies.html

docs/reference/get_ontology_structure.html

docs/reference/get_platform_information.html

docs/reference/get_platform_types.html

docs/reference/get_ranking.html

docs/reference/get_raw_data.html

docs/reference/get_sample_annotation.html

docs/reference/get_sample_by_ann_term.html

docs/reference/get_sample_by_gsm.html

docs/reference/get_sample_info.html

docs/reference/get_samples.html

docs/reference/get_samples_annotation_triples.html

docs/reference/get_samples_by_gse.html

docs/reference/get_samples_by_sampleSet.html

docs/reference/get_samples_info.html

docs/reference/get_sampleset_by_sampleid.html

docs/reference/get_sampleset_id.html

docs/reference/get_sampleset_id_by_name.html

docs/reference/get_samplesets_ranking.html

docs/reference/get_sparql_annotation_triples.html

docs/reference/index.html

docs/reference/merge_modules.html

docs/reference/plotDistribution.html

docs/reference/plot_annotation_network.html

docs/reference/plot_distribution_coexpressed_samplesets.html

docs/reference/plot_heatmap.html

docs/reference/plot_module.html

docs/reference/plot_module_distribution.html

docs/reference/plot_module_heatmap.html

docs/reference/plot_module_network.html

docs/reference/plot_network_coexpression.html

docs/reference/rcompass-package.html

docs/reference/totalCounts.html

docs/reference/view_plot.html

docs/reference/viewer.html

inst/extdata/GO_plant_slim.tsv

man/build_query.Rd man/create_module.Rd man/create_module_bf.Rd man/create_module_ss.Rd man/describe_module.Rd man/enrich_module.Rd man/get_OntologyNode.Rd man/get_annotation_triples.Rd man/get_available_compendia.Rd man/get_available_normalization.Rd man/get_available_plot_methods.Rd man/get_biofeature_annotations.Rd man/get_biofeature_by_name.Rd man/get_biofeature_id.Rd man/get_biofeature_ranking.Rd man/get_compass_version.Rd man/get_compendium_data_source.Rd man/get_experimentId_by_sampleSetId.Rd man/get_experiments.Rd man/get_ids_from_alias.Rd man/get_ontologies.Rd man/get_ontology_structure.Rd man/get_platform_information.Rd man/get_ranking.Rd man/get_raw_data.Rd man/get_sample_annotation.Rd man/get_sample_by_gsm.Rd man/get_samples.Rd man/get_samples_by_gse.Rd man/get_samples_by_sampleSet.Rd man/get_samples_info.Rd man/get_sampleset_by_sampleid.Rd man/get_sampleset_id.Rd man/get_samplesets_ranking.Rd man/get_sparql_annotation_triples.Rd man/plot_annotation_network.Rd man/plot_module_distribution.Rd man/plot_module_heatmap.Rd man/plot_module_network.Rd man/rcompass-package.Rd man/totalCounts.Rd man/view_plot.Rd

vignettes/.gitignore

vignettes/rcompass.Rmd vignettes/usecase01.Rmd

onertipaday/rcompass documentation built on Sept. 18, 2021, 5:13 p.m.