get_experimentId_by_sampleSetId: Get experimentAccessid and experimentName from sampleName

In onertipaday/rcompass: R Client for the COMPASS GrapgQL API

Description

use get_available_compendia to check all the available compendia

Usage

get_experimentId_by_sampleSetId(
  compendium = "vespucci",
  normalization = "limma",
  sampleSetId = NULL
)

Arguments

compendium	A string - the selected compendium
normalization	A string ('limma' as default)
sampleSetId	A string - if NULL(default) returns all available experiments ids for the selected compendium

Value

A data.frame with experimentAccessId, esperimentName and description

Examples

## Not run: 
ss=c("GSE75498_OS_T0-13-vs-GSE75498_C_T0-21","harvest_4","harvest_5")
my_ss <- get_sampleset_id(id_In = ss, normalization = "limma", useIds = FALSE)
get_experimentId_by_sampleSetId(sampleSetId = my_ss$id)

## End(Not run)

onertipaday/rcompass documentation built on Sept. 18, 2021, 5:13 p.m.