BP.4: An example of an object of class "equivSDhtestList" resulting...
In pablof1988/goSorensen: Statistical inference based on the Sorensen-Dice dissimilarity and the Gene Ontology (GO)
BP.4 R Documentation
An example of an object of class "equivSDhtestList" resulting from a call to 'equivSorensenTest'
Description
The result of all pairwise Sorensen-Dice equivalence tests between the gene lists in data
allOncoGeneLists which may be charged from this package.
To perform the tests, the information in these data was summarized as 2x2 contingency tables of GO items
enrichment, at level 4 of the BP ontology, and the tests were performed for an equivalence
limit d0 = 0.4444 and a confidence level conf.int = 0.95.
These results are based on gene lists which are non automatically updated, take them just as an illustrative
example.
Usage
data(BP.4)
Format
An object of class "equivSDhtestList" inheriting from class "list". It is a list of class "equivSDhtest"
objects.
Source
pablof1988/goSorensen documentation built on July 21, 2023, 8:38 a.m.
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| BP.4 | R Documentation |
An example of an object of class "equivSDhtestList" resulting from a call to 'equivSorensenTest'
Description
The result of all pairwise Sorensen-Dice equivalence tests between the gene lists in data
allOncoGeneLists which may be charged from this package.
To perform the tests, the information in these data was summarized as 2x2 contingency tables of GO items
enrichment, at level 4 of the BP ontology, and the tests were performed for an equivalence
limit d0 = 0.4444 and a confidence level conf.int = 0.95.
These results are based on gene lists which are non automatically updated, take them just as an illustrative
example.
Usage
data(BP.4)
Format
An object of class "equivSDhtestList" inheriting from class "list". It is a list of class "equivSDhtest" objects.
Source
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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