assayDetail: The details of assays returned by searching
In paodan/prideDownloader:
Description
Usage
Arguments
Value
Examples
Description
The details of assays returned by searching
Usage
1
assayDetail(accession = c("22134", "22135"), accessionRownames = TRUE)
Arguments
accession
character, a vector of assay accession. The default is
c("22134", "22135")
Value
a data.frame of assay details, including:
projectAccession, assayAccession, title, shortLabel, species,
sampleDetails, ptmNames, instrumentNames, keywords, experimentalFactor,
proteinCount, peptideCount, uniquePeptideCount, identifiedSpectrumCount,
totalSpectrumCount, ms2Annotation, chromatogram, softwares, diseases,
quantMethods, and contacts.
Examples
1
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{
## Not run:
# Search for one accession
assayDetail("22134")
# Search for two accessions
assayDetail(c("22134", "22135"))
## End(Not run)
}
paodan/prideDownloader documentation built on May 6, 2019, 11:44 a.m.
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Description Usage Arguments Value Examples
Description
The details of assays returned by searching
Usage
1 | assayDetail(accession = c("22134", "22135"), accessionRownames = TRUE)
|
Arguments
accession |
character, a vector of assay accession. The default is c("22134", "22135") |
Value
a data.frame of assay details, including: projectAccession, assayAccession, title, shortLabel, species, sampleDetails, ptmNames, instrumentNames, keywords, experimentalFactor, proteinCount, peptideCount, uniquePeptideCount, identifiedSpectrumCount, totalSpectrumCount, ms2Annotation, chromatogram, softwares, diseases, quantMethods, and contacts.
Examples
1 2 3 4 5 6 7 8 9 10 | {
## Not run:
# Search for one accession
assayDetail("22134")
# Search for two accessions
assayDetail(c("22134", "22135"))
## End(Not run)
}
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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