embed_nmf: embed nmf
In patrickCNMartin/Vesalius: Vesalius: Dissecting Tissue Anatomy from Spatial Transcriptomic Data
embed_nmf R Documentation
embed nmf
Description
embed in grey scale using NMF embeddings
Usage
embed_nmf(counts, dimensions, verbose = TRUE)
Arguments
counts
Seurat object containing normalised counts
dimensions
number dimension to retain from NMF
verbose
logical if progress messages should be outputed
Value
normalised NMF embedding matrix
patrickCNMartin/Vesalius documentation built on April 17, 2025, 11:31 p.m.
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| embed_nmf | R Documentation |
embed nmf
Description
embed in grey scale using NMF embeddings
Usage
embed_nmf(counts, dimensions, verbose = TRUE)
Arguments
counts |
Seurat object containing normalised counts |
dimensions |
number dimension to retain from NMF |
verbose |
logical if progress messages should be outputed |
Value
normalised NMF embedding matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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