neighborhood_signal: compute average expression of local neighborhood
In patrickCNMartin/Vesalius: Vesalius: Dissecting Tissue Anatomy from Spatial Transcriptomic Data
neighborhood_signal R Documentation
compute average expression of local neighborhood
Description
compute average expression of local neighborhood
Usage
neighborhood_signal(neighbors, signal)
Arguments
neighbors
list of local neighbors
signal
count matrix or feature matrix to average
Value
average feature matrix. The expression of each cell
is replace by the average expression of the k nearest neighbors
patrickCNMartin/Vesalius documentation built on April 17, 2025, 11:31 p.m.
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| neighborhood_signal | R Documentation |
compute average expression of local neighborhood
Description
compute average expression of local neighborhood
Usage
neighborhood_signal(neighbors, signal)
Arguments
neighbors |
list of local neighbors |
signal |
count matrix or feature matrix to average |
Value
average feature matrix. The expression of each cell is replace by the average expression of the k nearest neighbors
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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