API for paul-shannon/igvShiny
igvShiny: a wrapper of Integrative Genomics Viewer (IGV - an interactive tool for visualization and exploration integrated genomic data)
| Global functions | |
|---|---|
| .GWASTrack | Man page |
| .onLoad | Source code |
| .test | Source code |
| GWASTrack | Man page Source code |
| GWASTrack-class | Man page |
| display | Man page |
| display,GWASTrack-method | Man page |
| getGenomicRegion | Man page Source code |
| getUrl | Man page |
| getUrl,GWASTrack-method | Man page |
| get_basic_genomes | Man page Source code |
| get_cas_genomes | Man page Source code |
| get_css_genomes | Man page Source code |
| get_tracks_dir | Man page Source code |
| igvShiny | Man page Source code |
| igvShinyOutput | Man page Source code |
| loadBamTrackFromLocalData | Man page Source code |
| loadBamTrackFromURL | Man page Source code |
| loadBedGraphTrack | Man page Source code |
| loadBedGraphTrackFromURL | Man page Source code |
| loadBedTrack | Man page Source code |
| loadCramTrackFromURL | Man page Source code |
| loadGFF3TrackFromLocalData | Man page Source code |
| loadGFF3TrackFromURL | Man page Source code |
| loadGenomeAnnotationTrack | Man page |
| loadGwasTrack | Man page Source code |
| loadSEGTrack | Man page |
| loadSegTrack | Man page Source code |
| loadVcfTrack | Man page Source code |
| parseAndValidateGenomeSpec | Man page Source code |
| removeTracksByName | Man page Source code |
| removeUserAddedTracks | Man page Source code |
| renderIgvShiny | Man page Source code |
| showGenomicRegion | Man page Source code |
