overlap_percentage_plot: Plot top n GO-terms w.r.t percentage of significant genes...

In paulklemm/mygo: Create Report for mus musculus dataset of GO-term analysis using clusterProfiler

Plot top n GO-terms w.r.t percentage of significant genes Plot adapted from https://yulab-smu.github.io/clusterProfiler-book/chapter13.html

Description

Plot top n GO-terms w.r.t percentage of significant genes Plot adapted from https://yulab-smu.github.io/clusterProfiler-book/chapter13.html

Usage

overlap_percentage_plot(dat, n = 25, order_by = "percentage")

Arguments

dat	clusterProfiler GO-term table with attached GOTermGeneCount and Percent_Significant column
n	Number of GO-terms to label

Examples

  dat_goterms$Biological_Process %>%
    mygo::attach_goterm_genecount() %>%
    mygo::overlap_percentage_plot()

paulklemm/mygo documentation built on July 27, 2023, 11:36 a.m.