plot_kegg: Create KEGG pathway as PNG

In paulklemm/mygo: Create Report for mus musculus dataset of GO-term analysis using clusterProfiler

Create KEGG pathway as PNG

Description

Create KEGG pathway as PNG

Usage

plot_kegg(dat, pathway, species = "mmu")

Arguments

dat	dataframe containing columns EntrezID and log2FoldChange
pathway	kegg pathway name
species	kegg species ID

Value

png object

Examples

  mygo::plot_kegg(kegg_dat, pathway = "mmu04110") %>% mygo::plot_png()

paulklemm/mygo documentation built on July 27, 2023, 11:36 a.m.