plotContTable: Plot the confution matrix

In pengminshi/cFIT: cFIT (common Factor Space Integration & Transfer)

Description

Plot the confution matrix

Usage

plotContTable(
  est_label,
  true_label,
  short.names = NULL,
  y.ord = NULL,
  x.ord = NULL,
  xlab = "Reference",
  ylab = "",
  threshold = NULL
)

Arguments

est_label	vector of estimated labels
true_label	vector of true labels
short.names	(optional) rename the reference true labels for plots
y.ord	(optional) a vector lenght of the number of rows of table, re-ordering the rows
x.ord	(optional) a vector lenght of the number of columns of table, re-ordering the columns
xlab	(optional) string, x axis label (default reference)
ylab	(optional) string, y axis label (default empty)
threshold	(optional) non-negative value, lower threshold, above which the values are shown (default NULL)

Value

the plot (ggplot object)

pengminshi/cFIT documentation built on July 11, 2021, 11:12 p.m.