solve_lambda_list_penalized: Solve for dataset specific scalings lambda.list with...

In pengminshi/cFIT: cFIT (common Factor Space Integration & Transfer)

Description

Solve for dataset specific scalings lambda.list with Stochastic Porximal Point method

Usage

solve_lambda_list_penalized(X.list, W, H.list, b.list, lambda.list.old, iter)

Arguments

X.list	A list of ncells-by-ngenes gene expression matrix.
W	ngenes-by-r non-negative common factor matrix
H.list	A list of factor loading matrix of size ncells-by-r
b.list	A list of shift vector of size p (ngenes).
lambda.list.old	lambda.list from last iteration
iter	current iteration, for calculating the step size.

Value

lambda.list A list of m scaling vector of size p (ngenes).

pengminshi/cFIT documentation built on July 11, 2021, 11:12 p.m.