View source: R/findscientificnames.R
file_get_scientific_names | R Documentation |
This uploads a file (a PDF, Microsoft Word document, plain text file, etc.) and extracts all scientific names from it. For example, you can input a PDF of a scientific article and it will return all the scientific names in that article.
file_get_scientific_names(file_name, search_engine = 0, above_species = FALSE)
file_name |
The file path and name to extract names from |
search_engine |
1 to use TaxonFinder, 2 to use NetiNeti, 0 to use both |
above_species |
Boolean. Default to FALSE. If TRUE it will only return scientific names above the species level. |
It requires that curl is installed on your system.
A vector of scientific names
https://github.com/phylotastic/phylo_services_docs/tree/master/ServiceDescription
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