View source: R/separatedarktaxa.R
taxon_separate_dark_taxa_using_otol | R Documentation |
Separate dark from known taxa on OpenTree of Life
taxon_separate_dark_taxa_using_otol(
taxon,
filters = c("environmental", "sp\\.", "cf\\.", "uncultured", "unidentified",
" clone", " enrichment")
)
taxon |
A taxon to get all species for |
filters |
A character vector of strings to exclude |
A list containing a vector of dark names, a vector of known names, and fraction.dark
https://github.com/phylotastic/phylo_services_docs/tree/master/ServiceDescription or the rotl package, another interface to Open Tree of Life
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