README.md

In piotr-ole/kmer: kmer counting package

seqR

Fast k-mer counting is crucial in working with peptides sequences. It may take part in building features for machine learning models for peptides prediction or as a part of sequence comparison software. SeqR provides fast k-mer counting implementation in R written with Rcpp.

Package installation and loading

Current version is available on Github, it can be build on Windows, Linux and Mac OS. For package installation from R Console the \code{devtools} package is needed. To install seqR and load it to R session the following instructions have to be executed.

```{r setup, eval=FALSE}

install.packages('devtools') # if you dont have it installed

devtools::install_github("piotr-ole/seqR") library(seqR) ```

Examples

piotr-ole/kmer documentation built on Nov. 14, 2019, 8:10 p.m.