create_kmer: Create k-mer
In piotr-ole/kmer: kmer counting package
Description
Creates k-mer (of type string) from encoded (integer) vector
based on encoding described in num2str and kmer_decorator
Creates k-mer (of type string) from encoded (integer) vector
based on encoding described in num2str and kmer_decorator
Arguments
s
integer vector representing an encoded sequence
d
integer vector representing the gaps in k-mer
begin_index
integer representing the start of k-mer (in s)
kmer
integer vector representing an encoded sequence
num2str
hash map representing encoding of sequence items between integer and string
kmer_decorator
a function that can add extra characters to k-mer (for example position information)
Value
a string representing a result k-mer (that is used for presentation)
a string representing a result k-mer (that is used for presentation)
piotr-ole/kmer documentation built on Nov. 14, 2019, 8:10 p.m.
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Description
Creates k-mer (of type string) from encoded (integer) vector
based on encoding described in num2str and kmer_decorator
Creates k-mer (of type string) from encoded (integer) vector
based on encoding described in num2str and kmer_decorator
Arguments
s |
|
d |
|
begin_index |
|
kmer |
|
num2str |
|
kmer_decorator |
a |
Value
a string representing a result k-mer (that is used for presentation)
a string representing a result k-mer (that is used for presentation)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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